Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1562 |
Symbol | |
ID | 6207322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1936244 |
End bp | 1937596 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641691203 |
Product | major facilitator transporter |
Protein accession | YP_001818446 |
Protein GI | 182413380 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.796996 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCCG ACGCCGGCCA CCCGAGCCGC CCCGTGCTGC AACCGCCTCA TCCGCCCCAT CCGCCCGGGC TGCGCGCCCG GCGCGGCCTG AACTGGGCCA CGGTGGGCCT GATGTACACG AGCTACTATT TCTGTCGCTA CAACTTCTCG TATGCAAACA AGGCGATCAA GGACGAGTTC GGGTTCACGA ACTCGGACAT GGCGACGATG CTGTCGGCGC AGTTTATCGC CTACGGTTGC GGGCAGATCA TCAACGGGCT GCTGACCGAT CGCATCGGCG GCAAGAAGGC GATGCTGATC GGCGCGGCCG GCACGATCAC GGTCAACCTG CTGTTTGGCG CGGCTTCGTT CTGGGGCATG CTGAGCCTGT TTTCGCTACT GTGGGGCCTC AACGGCTACA TCCAGTCGTT TGGCTCGCCC GGGTTCATCA AGATCAACAG CGCGTGGTTC AGCGAAAAGC AGCGCGGCAC GTTTGCGGGG ATCTTCGGGT TCATGATCAA CCTCGGCCGG CTGGCGGCGA ACAAGCTGCT GCCGCTGCTG CTGGCGGGCT TCGCGATCGG CACGATGATG AACGTGCCGC CGCTGCACTG GCGCTGGGTG TTCTGGGTGC CGGCGATCAT CGCCTCGATC GTGGCGGTGG TGTTCGCGTT CGTGGTGAAG GACACGCCGG AGGAGGCCGG CTTCCACGAT GTCTTCAAAG GCGAAGCAGA TCACGCGGAA ACCAACGTTC GCGCGGAGAT CTGGCCGGTG CTGACGCATA TCGTGACGAA CCCGATGGTG TGGATCATCG CGCTGGCGTA TGCGTGCACC GGCGCGGTGC GGCAGGCGAT CGACCAGTGG TTCCCGGTGT ATTTCCAGGA AGTGCATCAC CTCAAGATGA CGGGCGCGCA GTTCCAGTGG TTGGGCTACA TGATCCCGCT GGTGGCGTCG TGCGGGTCGT TTCTTTCCGG TTGGGTGTCG GACCGTTTTT TCCAGTCGCG GCGCGCGCCC GTGGCCGGCG CGGTCTACAT CATCGAGATG GTCGTCATTC TGGCGGCGAC GCAGGTGCAC ACGGTGGGCT GGGCGATCGG GTTCTTCATC ATGGTGTCGT TCACCGTGAA CTCCACGCAC TCGCTACTCG GGCCGGCGGC GGCGATGGAT ATCGGCGGCC GCAAGATGGC GGCGTTCGCC TCGGGCTGCA TCGACGCCTT CCAGTATTTC GGCGCGGCGC TGGGGATGAC GATCCTCGGC TACGTCCTCG ATAATTACGG CTGGGGTTAC TACTTTTACT ACATGCTACC GTTCGGCGTG GTCGGATCGA TTTTGATGTT CTCGATTGCG CACCGGAAGA GCCTGAAGAA GGGCGCGAAG TAA
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Protein sequence | MSSDAGHPSR PVLQPPHPPH PPGLRARRGL NWATVGLMYT SYYFCRYNFS YANKAIKDEF GFTNSDMATM LSAQFIAYGC GQIINGLLTD RIGGKKAMLI GAAGTITVNL LFGAASFWGM LSLFSLLWGL NGYIQSFGSP GFIKINSAWF SEKQRGTFAG IFGFMINLGR LAANKLLPLL LAGFAIGTMM NVPPLHWRWV FWVPAIIASI VAVVFAFVVK DTPEEAGFHD VFKGEADHAE TNVRAEIWPV LTHIVTNPMV WIIALAYACT GAVRQAIDQW FPVYFQEVHH LKMTGAQFQW LGYMIPLVAS CGSFLSGWVS DRFFQSRRAP VAGAVYIIEM VVILAATQVH TVGWAIGFFI MVSFTVNSTH SLLGPAAAMD IGGRKMAAFA SGCIDAFQYF GAALGMTILG YVLDNYGWGY YFYYMLPFGV VGSILMFSIA HRKSLKKGAK
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