| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1548 |
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| Symbol | |
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| ID | 6205686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1919758 |
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| End bp | 1921050 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641691189 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001818432 |
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| Protein GI | 182413366 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.758672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTACG CGCTCCTCTC CAAAGAAGAA CTCATCGACC GGCTCGAGAA ATTCGAGCGC
GAGCGCACGA CGTTTGAGCA GGACCTGTTT GCCGCGGTCA AGGAGCTGCG CGACGTCAAG
GCCGCCATCG ACGAGCACTC GATCGTGGCG ATCACGGACG CGGCGGGAAA GATCACCTAC
GTCAACGACA AGTTCTGCGC GATCTCGAAA TACCCGCGCG AGGAACTGCT CGGCCAGGAC
CACCGGATCA TCAACTCGCG CACGCACCCC AAGGAATTTT TCCGCGGTTT GTGGAAGACG
ATCAGCAGCG GTCACGTCTG GCACGGTGAG ATCCGCAATC GCGCGCGGGA CGGCTCCTAC
TACTGGGTCG ACACGACGAT CTATCCCTTC CTCAACCCCG CCGGCACGCC GGTGCAGTAT
GTCGCGATCC GGACCGACGT CACCCGCCGC CGCGAGAACG AGGAGGAACT CGCGCGCACG
GCGGCGGATC TCGCGGAGAA GAACAAGGAA CTCGAAGCGA TCGTCTACAC GGTGTCGCAT
GATCTGCGCT CGCCGCTGGT CAACGTGCAG GGCTTCGGCA AGCAGCTGAG CCGCGCCTGC
GACAAGATCA CCGCGGCGAT GGTGGCGGCG AAGGACGGGC TCGTGCCGAT CGCGCCGCTC
GAGCAACCGG TGAAGGAGGC GATCCCGCAG GCCTTGCGGT TCATCAACGC CGGCGTGAAC
AAAATGGAGA TGCTGCTGGC GGGCCTGCTG CGTTACTCCC GGCTCGGGCG GATGGCGCTG
ACGATCGCTC CGATCGAGGT GAACCCGCTG ATCGCGACGA TCCTGGCGGC GATGAAATTC
CAGCTCGACG AAATCAAGGC CGAGGTGCGA GTCGAGCCGC TGCCCGATTG CCTGGGCGAC
AGCGTGCAGG TAAGCCAGGT GTTTACCAAC CTGATCGACA ATGCGCTGAA ATACCGGGCG
AAAGACCGGC CGCTCCGCAT CACCGTCACC GGCTATGCCG AGCACGGCCA GGCGGTGTAT
CGCGTGGCCG ACAACGGCAT CGGCATTCCG CTGGCGCACC AGCCGAAGAT TTTCGAGATC
TTCCACCGGC TGGATCCGGA CGCGGGCCCG GGCGAGGGGC TGGGGCTGAC GATCGCGCAA
CGGGTGCTGG AGCGGCAGCG CGGGAGGATT TGGGTCCAGA GCGAAGAAGG AGCTGGATCA
ACGTTTTTTG TCTCATTACC TCTGAGCCCG AGCCATGCAG TCGATAGCCT AGAGTCCAGA
GTCCAGAGCC GGAAGGAAGA GCGAGAAACG TAA
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| Protein sequence | MDYALLSKEE LIDRLEKFER ERTTFEQDLF AAVKELRDVK AAIDEHSIVA ITDAAGKITY
VNDKFCAISK YPREELLGQD HRIINSRTHP KEFFRGLWKT ISSGHVWHGE IRNRARDGSY
YWVDTTIYPF LNPAGTPVQY VAIRTDVTRR RENEEELART AADLAEKNKE LEAIVYTVSH
DLRSPLVNVQ GFGKQLSRAC DKITAAMVAA KDGLVPIAPL EQPVKEAIPQ ALRFINAGVN
KMEMLLAGLL RYSRLGRMAL TIAPIEVNPL IATILAAMKF QLDEIKAEVR VEPLPDCLGD
SVQVSQVFTN LIDNALKYRA KDRPLRITVT GYAEHGQAVY RVADNGIGIP LAHQPKIFEI
FHRLDPDAGP GEGLGLTIAQ RVLERQRGRI WVQSEEGAGS TFFVSLPLSP SHAVDSLESR
VQSRKEERET
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