Gene Oter_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1530 
Symbol 
ID6206410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1896041 
End bp1898494 
Gene Length2454 bp 
Protein Length817 aa 
Translation table11 
GC content67% 
IMG OID641691171 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_001818414 
Protein GI182413348 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.648168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATAG GTTTGCTGCT GGCGCAAGTC CTCGCCCAGG AAGAGAGCCT TTTTCGGTCC 
ACCGTGTTCA CGACCGCCGG TGCGGTGGCG AACGCCGTGA CGGCGGCTGC GTTCCTCGCG
GTGCCCTTCG CGCTTTTCAG CCTGCACCGC AGTGAACGCC GGCGCCCGGC GTTGCTGGGC
GTGGCCGGTG CGGGCGCGGT GGTCGCGGGA ATCCTTCACG TGCCCGGCAT CTGGAGCGCG
GACGCAACGG TGACGCTGCC GGCGGCGCTC CTGAAACTGT CGGTCGCCGT CGGTGCCACG
GCGGGAGTCA TGCTGCTTTT CGAATACGCG CGCCGCGCGG CGGCGACGGT CCGAGACGCT
GCGGACCGCA ACCACGAGCT CGCGCGCAAG CTGGACGACC TGAGGCGGAC GAACGTGACG
TTGCAGGCAT CCGAGGCGAT GTTCCGCAGC TTCCTGGACC ACTGCCCCGC GCTGGCGTGG
ATCACCGACG AGGACGGGAC GTTCCACTAT GTGAGCGAAC CGTGCCGACG GCATCACCGG
GCCGCAGGCG AATTGCTGGG GCGGCGCATC ACGGACATTT TTCCCGCGGA ACGCGCGCAG
CGCCATCTGG AGCACAATCG TCAGGTGCTG GCAGAGCAGA AGCTGCTCGA GTTTGACGAA
CCCGGGGAGG GCGGGATCGA ACATCGCGTG TTCAAGTTTC CGCTGCGGGA CGGGAACGAT
CGGCGGCTGG TCGCGGGCAT CGCCTTCGAT GTGACGGAGC AGCGGCGCGT GCGCGAGACG
CTCCGCGATC AATCGGGTCT GCATGCCGCC CTTGGCGAGG CGATGCGGGT GTATTTGGAA
TCGGGTGACT GGGCGCGGAC GTTTGCCCTG CTCCTGCGCT GCGCGCTGGT GCAAACCCGC
AGTGAGTTCG GCTTCGTCGG CGTAGTGCTC GATCGCCAGC GGCTCCGGCT GGTGGCGGGC
GAGGGCCCCG AGTGGATGCG GCAGGTCAGC CGGGAGTTGC GCGCCGAGCC GGGCGCAAAG
GCGGCGAGCG ACGTGGATTT CAGCCGGCTG GAGCCGCCGC TGCCGCGGGC GTTGCGAACC
GGCGAGGTGG TGGCGGTGGA TCCGCCCGAC GGCGAGACGA GCGAACCGGC GCGCGGGAGC
TTTTTCGCGC TGCCGATCCT GCGCGAGAAA CAAGTCGTGG GCCTGCTGGG CGTCGGGCGT
TCGACGGGAC GCTACGACGG CAACTCGCCG GGCCAGTTGG TGCAAATCAG CCAGCAAGCG
GGCGTGTTTT GCGACTGCTA CCGGCGGGAA CTCCGCGAGG GCGCCCTGGA GGAACAGCTG
CGCGTGGCGC AGAAAATGGA AGCCGTCGGC ATGCTGGCGG GCGGCGTGGC GCACGATTTC
AACAACCTGC TGCAAGTCAT CCAGGGCTAC ACCGGGATCG CGCTGGAGGC GTCGACGACT
ATCGCGGAGC GCCGCGCGAG CCTCGAGCAA GTGCGACACG CCAGCGAACG TGCGACGCAA
TTGACCCGGC AGCTCCTGGC GTTCGGTCGC CGGCAGAACC TGCAGCAGAG CGATCTCGAT
CTAAACCAAG CGATCCGTGA TTTGCTCCGG ATGATCCGCC GGCTGATCGG CGAACAGATC
ACGGTGGACT TCATCCCAGG GCATGAACTC GGGAACCTGC ACGCCGACCG GAGTCAGATC
GATCAGGTGC TGTTGAATTT GTGTTTGAAC GCGCGCGACG CGATACGGCA GGGCGGGCGG
ATCACGATCG AAACGGAAAA CGTGCTGGTG AACGGCGCGT TTCGCGAGAG TCACCCGTGG
GCCCAACCGG GCCGCTACGT GCTGATGACC GTTTCGGACA ACGGCGTGGG CATGGATCGC
GAGACAACCA CGCGCATCTT CGAGCCGTTC TTCACCACGA AGAACCACGA GAAGGGGACT
GGGCTCGGAC TGTCGGTGGT GTACGGCGTG GTGAAGCAGC ACGGCGGCAT GGTGCACGTC
TACAGCGAGC CGCAGAAAGG GACGACGTTC AAAATCTACC TGCCCATCGT GGAACGATCC
GCCACGGTGG TCGGGCCGAA GCACACGCCC ACGCTGGCAC GCGGCACCGA AACGATCCTG
CTGGCGGAGG ACGAGCCGAT GGTACGCGAC CTGGCGCGGC GGATACTGGC GCGCGCCGGT
TACCGCGTGC TGCTGGCGTG CGATGGCCCC GAAGCCTGTG CGCTGTTCAC GCAGCATGCC
GATACGATCG CGCTCGCGAT CCTCGACGTG GTGATGCCGC AGTTGGGCGG ACGCGAAGTC
TACGACCGGA TTTCCGCGCT GCGACCGGGG CTGCCGGTGA TTTTTTGCAG CGGTTACGCG
GGATCGGCGC TCGGCGCGGA TCTGCCCGGA GGGGATACGC GACGGCTGCT CACAAAGCCC
TACGGCGCGG ACGAAATGCT TGGCAGCGTG CGGGAAGCGC TCGATCAGCG GTGA
 
Protein sequence
MRIGLLLAQV LAQEESLFRS TVFTTAGAVA NAVTAAAFLA VPFALFSLHR SERRRPALLG 
VAGAGAVVAG ILHVPGIWSA DATVTLPAAL LKLSVAVGAT AGVMLLFEYA RRAAATVRDA
ADRNHELARK LDDLRRTNVT LQASEAMFRS FLDHCPALAW ITDEDGTFHY VSEPCRRHHR
AAGELLGRRI TDIFPAERAQ RHLEHNRQVL AEQKLLEFDE PGEGGIEHRV FKFPLRDGND
RRLVAGIAFD VTEQRRVRET LRDQSGLHAA LGEAMRVYLE SGDWARTFAL LLRCALVQTR
SEFGFVGVVL DRQRLRLVAG EGPEWMRQVS RELRAEPGAK AASDVDFSRL EPPLPRALRT
GEVVAVDPPD GETSEPARGS FFALPILREK QVVGLLGVGR STGRYDGNSP GQLVQISQQA
GVFCDCYRRE LREGALEEQL RVAQKMEAVG MLAGGVAHDF NNLLQVIQGY TGIALEASTT
IAERRASLEQ VRHASERATQ LTRQLLAFGR RQNLQQSDLD LNQAIRDLLR MIRRLIGEQI
TVDFIPGHEL GNLHADRSQI DQVLLNLCLN ARDAIRQGGR ITIETENVLV NGAFRESHPW
AQPGRYVLMT VSDNGVGMDR ETTTRIFEPF FTTKNHEKGT GLGLSVVYGV VKQHGGMVHV
YSEPQKGTTF KIYLPIVERS ATVVGPKHTP TLARGTETIL LAEDEPMVRD LARRILARAG
YRVLLACDGP EACALFTQHA DTIALAILDV VMPQLGGREV YDRISALRPG LPVIFCSGYA
GSALGADLPG GDTRRLLTKP YGADEMLGSV REALDQR