Gene Oter_1513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1513 
Symbol 
ID6204805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1876333 
End bp1877490 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content65% 
IMG OID641691154 
Producthypothetical protein 
Protein accessionYP_001818397 
Protein GI182413331 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.569001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTT TCTCCCTCGT TGCGAGCAAC CTAAAGCGGA AAAAGGTCCG CACGCTGCTC 
ACGATCCTTT CGATCTTCGT CGCGTTCTTC CTCTTCGGCC TGCTCTGCGC ACTGAAGAAG
GCGCTCGACG GCGGCGTGAG CGTCGCCGGT GCCGACCGGC TCATCACGCG CCACAAGGTT
TCCATCATCC AGATGATGCC GGTCAGCTAC CGCAACCGCA TCGCCTCGAT GCCCGGCGTC
TCCGGCATCG CCTCGCAATC GTGGTTCGGC GGAATCTATC AGGACCCGAG CAACTTTTTC
GCGACGCTCG CCGTGGATCC GGAGCCGTTC CTCGAGCTGT ATCCCGAGTT CGTGCTGCCA
GCGGATCAGA AAGCCACCTG GCTCAAGACC CGCACCGGCG CGATCGTCGG CCGCGCCACG
GCCGAGCGGT TCAAGTGGAA AGTAGGCGAC CGCATCCCGC TGCAGTCACC CATCTGGCAG
CGCGAGGACG GCGGTCACGC GTGGGAATTC GATCTCGTCG GTATTTACGA CGCCGGCAAA
AAGGGCACCG ACACGACCCA GTTCTTCCTC CACTACGACT ATTACGACGA AGGCCGCGCT
TTCGCGAAAG GCCAGATCGG TTGGTTCACG GTGCGCATCG CCGATCCCGC GCAGGCCGCC
CAGATCGCCG CGCGGATCGA CCGCGAATTC GCCAACTCGC CCACCGAAAC CAAGACCGAG
CCGGAGGGCG CGTTCGCGGC CGGGTTCGCC CAGCAGGTCG GCGACATCGG GCTGATCGTC
ACCGGCATCA TGAGCGCGGT GTTCTTCACC ATCCTGCTCG TCGCCGGCAA CACGATCGCC
CAAGGTGTGC GCGAACGCGT TGAGGAGATC GGCGTGCTGA AGGCGGTCGG CTTTCCCAAC
GGACTCGTGC TCGGGCTCGT GCTCGCGGAA TCCTGCCTGA TCGCCGCGCT CGGCGGGTTG
GTTGGACTCG GGCTCGCCTG GCTCGCGACG ATGGGCGGCA GCCCGGTGCC CGGCCTGCTG
CCGGTGTTCT TCATTCCCTC GAAGGACATC CTGCTCGGGA TCGTCCTGGT CCTTGCCTTG
GGGCTGCTCA CCGGCCTGCT GCCCGCACTG CAGGCCATGC GGCTCGGCGT GGCCGACGCG
CTCCGCCGGC AAACGTGA
 
Protein sequence
MKFFSLVASN LKRKKVRTLL TILSIFVAFF LFGLLCALKK ALDGGVSVAG ADRLITRHKV 
SIIQMMPVSY RNRIASMPGV SGIASQSWFG GIYQDPSNFF ATLAVDPEPF LELYPEFVLP
ADQKATWLKT RTGAIVGRAT AERFKWKVGD RIPLQSPIWQ REDGGHAWEF DLVGIYDAGK
KGTDTTQFFL HYDYYDEGRA FAKGQIGWFT VRIADPAQAA QIAARIDREF ANSPTETKTE
PEGAFAAGFA QQVGDIGLIV TGIMSAVFFT ILLVAGNTIA QGVRERVEEI GVLKAVGFPN
GLVLGLVLAE SCLIAALGGL VGLGLAWLAT MGGSPVPGLL PVFFIPSKDI LLGIVLVLAL
GLLTGLLPAL QAMRLGVADA LRRQT