| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1460 |
|---|
| Symbol | |
|---|
| ID | 6204839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1822255 |
|---|
| End bp | 1822737 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641691101 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001818344 |
|---|
| Protein GI | 182413278 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2258] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.371187 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCGA CGCTCACCCT TCTCGCCTCA GACACGGTCC AGCTGCTCAC CCGTTCGCCG
GCGCACAACT TCTTCGGCCA TCACGGCGGA CCCGCAGGTG AAGCCGCAGT GGAAGTCGTC
GACGCACTCG AGTGCATCGC TGGTCGCGGC GTGCGCGGCG ATCGCTTCTT CGACTACCGG
CCCGACTACA AGGGCCAGAT CACCTTCTTC GCGCTGGAGA CGTTTGTGCA GCTGCAGCGC
GAACTCGGAT CGCCGCTGGC CCGGCCGGAA GCCACGCGAC GCAACGTGTT CACGCGCGGG
ATCGATCTCG CCTCGCTGGT CGGCAGCGAA TTTGAGCTGC AGGGCGTGCG GTTTTTCGGG
ACCGAGGAAT GCCGGCCATG CTACTGGATG GACCAGGCGC TCGGGCCCGG CGCCAACGAC
TGGCTGCGCG GCCGCGGCGG ACTCCGCGCG CGGATTCTCT CGGACGGCTG GCTGCGACAA
TAG
|
|---|
| Protein sequence | MIPTLTLLAS DTVQLLTRSP AHNFFGHHGG PAGEAAVEVV DALECIAGRG VRGDRFFDYR
PDYKGQITFF ALETFVQLQR ELGSPLARPE ATRRNVFTRG IDLASLVGSE FELQGVRFFG
TEECRPCYWM DQALGPGAND WLRGRGGLRA RILSDGWLRQ
|
|---|
| |