| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1412 |
|---|
| Symbol | |
|---|
| ID | 6204636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 1775363 |
|---|
| End bp | 1776298 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641691054 |
|---|
| Product | putative formyltransferase |
|---|
| Protein accession | YP_001818297 |
|---|
| Protein GI | 182413231 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAGC CGCGAATCCT CTTCTTCGGT TACAGCGAAG TCGGCTACGA GTGTCTTTCG
CTGCTGCTGG AACGCGGCGA CAATGTTGTC GCGCTCGTCA CGCACGAGGA TAACCCGCAC
GAGAAAATCT GGTTCAAGAC GCCGGCGCAG GCCGCCCGCG AGCGAGGGAT TCCGGTGTTC
ACGCCCGAGT CGGTGAACAC GCCGGAGTGG CGCGAGCGGA TCGCGAGGCT GCAGCCGGAG
CTGATCCTCT CGGTCTACTA CCGGCACATG ATCGGCACGA AGCTCCTGGC GCTGCCGCGG
CTCGGCGCCT TCAACCTGCA CGGTTCGCTG CTGCCGAAAT ATCGCGGCCG GGCGCCGATC
AACTGGGCGG TGTTGCACGG CGAGCCGCGG ATCGGGATGA CGCTGCACCG CATGGTGAAG
AGTGCCGACG CGGGCGCAAT CGTGGATCAG GACGGTGTGG ATATTGGCCC GCGCGACACC
GCCGAGCAGG CGTTCCGGAA AGTGCTGCCG TGCGCCCGGC GGGTGCTCGC GCGGCAGATC
GATGCGCTGC TCGCCGGTAC CGCGAAGGAG AGGCCGCAGG ACGATACGCA GGCGACCTAC
TTCGGCGGAC GAACGCCCGA GGACGGCCGG ATCGACTGGA CGCGGAGCAG CGCGCAGATT
TTCAACCTGA TCCGCGCGGT GACGGATCCG TATCCGGGCG CGTTCACGGA CGTGGGCGGC
GCGCGACTGA TGGTCTGGTG GGCCGAGCAG GATTCCGCCG CGACGAGCGA CCGCCGCGGC
CGGCCGGGCG AGGTGTTGTC GCTCAATCCG CTCGTGATCG CGACGGGAGA CGGCGCGCTG
GAGTTGACGA AGACGGAATG GCGCGCGGCG CCGGTGCCGG AGCTGCAGGT TGGGCAGGTG
CTGGAATCGA CGGCGCCAAC TCCGCCCGCA TCGTAA
|
|---|
| Protein sequence | MSKPRILFFG YSEVGYECLS LLLERGDNVV ALVTHEDNPH EKIWFKTPAQ AARERGIPVF
TPESVNTPEW RERIARLQPE LILSVYYRHM IGTKLLALPR LGAFNLHGSL LPKYRGRAPI
NWAVLHGEPR IGMTLHRMVK SADAGAIVDQ DGVDIGPRDT AEQAFRKVLP CARRVLARQI
DALLAGTAKE RPQDDTQATY FGGRTPEDGR IDWTRSSAQI FNLIRAVTDP YPGAFTDVGG
ARLMVWWAEQ DSAATSDRRG RPGEVLSLNP LVIATGDGAL ELTKTEWRAA PVPELQVGQV
LESTAPTPPA S
|
|---|
| |