Gene Oter_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1399 
Symbol 
ID6205438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1756493 
End bp1758580 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content67% 
IMG OID641691041 
Productcarbon starvation protein CstA 
Protein accessionYP_001818284 
Protein GI182413218 
COG category[T] Signal transduction mechanisms 
COG ID[COG1966] Carbon starvation protein, predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACGG TTCCTGCTTC TGTTCGCCCT TGGACTCCCT GGCGCCTGCT TGGTTGGGCC 
GCGGTCGCAT TGCTCGGAGC GGGCTCGATC GGCATTCTCG CCTGGTCGCG CGGCGAGCCG
GTCAACGCGC TCTGGATGGT CGTCGCGTCC GTCTGCGTTT TTGCCATCGC GTACCGGTTC
CACTCCGCGT GGTTGATGGC CAAGGTGCTG ACGCTGGACG AACTGCGGGC CACGCCGGCG
GTGGTGCACG AGGACGGCAA GGATTTCGTG CAGACCAACC GGTGGGTCGT GTTCGGCCAC
CACTTCGCCG CGATCGCGGG GCCGGGGCCG CTCGTGGGGC CGGTGCTGGC GGCGCAATTT
GGCTTCCTGC CGGGCATGCT GTGGATCCTG ATCGGCGCGA CGCTCGGCGG GGCGGTGCAC
GACAGCGTGA TCCTGTTTTG CTCGGTCCGG CGCGGTGGCC GCTCGCTGGG CCAGATTGTC
AGCGACGAGG TCGGCCGGTT CGCAGGCGTC GTCGCGCTGC TGAGCATCGT GGCGATCATG
GTGATTCTCA TCGCGGTGCT CGCGCTCGTG GTGGTCAACG CACTCGCGGA AAGCCCGTGG
GGCCTGTTCA CGATTGCCGC GACCATGCCG ATCGCCGTGA TCATGGGTTG CGCGATGCGT
TACGGGCCGC ACGGCGGCCG CTGGCTCGGT TGGGTGAGCG CGTTCGGCGT CGTTGCACTG
CTCGGCTCGG TCTACTGCGG GCAGTTCATG AACCAATGGG GCTGGGCGGA AGCCCTGACC
CTCAAGGGCA CGACGCTGGC GTGGTGGATT ATCGGCTACG GCGTACTGGC GTCGATCCTG
CCGGTGTGGC TGCTGCTCGC GCCCCGCGAT TATCTGAGCA CGTTCATGAA AATCGGCACG
GTCGCCGCCC TCGGCGTGGC GATCGTGCTG CTCGCGCCGG TGCTGAAGAT GCCGGCGCTC
ACGCGTTTCG TGGACGGCAC CGGGCCGGTG TTTGCGGGGC CGGTATTCCC GTTCTGCTTC
ATCACCATCG CGTGCGCGGC GGTGTCCGGC TTCCACTCGC TGATCGCATC CGGCACCACG
CCGAAGCTGC TGACCCGCGA GAGCGATATT CGGGTGATCG GTTACGGCGC CATGATCACG
GAGATGCTGG TCGGCATCAT GGCGCTGATC GCCGCATGCA CGATGGAGCC GGGGCAATAT
TTCGCCATCA ACATGAAGGG CGAGGCGGCG GCGGTGACCG CGCAGATTAC GCAACTCGGG
TTTCCGGTGA CGCCGGCCGA CATGGCGGCG CTCGCAGACG AGGTCGGCGA AAAGACGATG
ATTGGGCGAG CCGGCGGCGC GCCGACGTTC GCGGCCGGCA TGGCGCACAT GTTTGCCGGC
GTGCTGGGCG GCAAGACCGC ACTCGCGCTC TGGTATCACT TTGCGATCAT GTTCGAGGCG
CTGTTCATCC TCACGACGAT CGACGCGGGC ACGCGGGTGG GCCGGTTCAT CGTGCAGGAC
CTGCTTGGAC ATGTCTCGAA GCCGCTGAGC AACACGCGCT CGGTTGGCGG CAGCACGCTG
GCCACGCTGT TGTTCGTTGG CGCCTGGGGC TGGTTCCTTT ACCAGGGCGT GATCGATCCG
CTTGGCGGCA TCAACTCGCT CTGGCCGATC TTTGGGGTCG CGAACCAACT GCTGGCGGTG
ATCGCGCTCG CGCTCGGCAC GACGGTCCTG ATCAAGATGG GCCGCACGCG CTACGTGTGG
TGCACGCTTG CCCCGTTGGC GTGGCTGCTC GCCGTCACGA TGAGCGCGGG TTGGATGAAG
ATTTTTGGCG CGAATCCGCG GCTCGGTTTC CTGTCGGCGG CGCGTGATCT GGCGGCGAAG
ATCGCGAGCG GTGGCACGCC GGCGCAGCTC GCGCAATGGG AGCGGCTGCT CTTCAACAAC
TACGTCAACA CCGCCATCAC GGCGACGTTT CTAGTGCTGG TGGCGATCGT GGTGATCGCG
AACGCTCGCG TCTGGTGGCA GCTGCTCTCC GGCCGCCGCG CGGCGGACCT GCACGAGGAG
AAATATGTGG CGGTGAGGGT GGCGGAAAGC CCAGAGCTGA GCGTCTAG
 
Protein sequence
MSTVPASVRP WTPWRLLGWA AVALLGAGSI GILAWSRGEP VNALWMVVAS VCVFAIAYRF 
HSAWLMAKVL TLDELRATPA VVHEDGKDFV QTNRWVVFGH HFAAIAGPGP LVGPVLAAQF
GFLPGMLWIL IGATLGGAVH DSVILFCSVR RGGRSLGQIV SDEVGRFAGV VALLSIVAIM
VILIAVLALV VVNALAESPW GLFTIAATMP IAVIMGCAMR YGPHGGRWLG WVSAFGVVAL
LGSVYCGQFM NQWGWAEALT LKGTTLAWWI IGYGVLASIL PVWLLLAPRD YLSTFMKIGT
VAALGVAIVL LAPVLKMPAL TRFVDGTGPV FAGPVFPFCF ITIACAAVSG FHSLIASGTT
PKLLTRESDI RVIGYGAMIT EMLVGIMALI AACTMEPGQY FAINMKGEAA AVTAQITQLG
FPVTPADMAA LADEVGEKTM IGRAGGAPTF AAGMAHMFAG VLGGKTALAL WYHFAIMFEA
LFILTTIDAG TRVGRFIVQD LLGHVSKPLS NTRSVGGSTL ATLLFVGAWG WFLYQGVIDP
LGGINSLWPI FGVANQLLAV IALALGTTVL IKMGRTRYVW CTLAPLAWLL AVTMSAGWMK
IFGANPRLGF LSAARDLAAK IASGGTPAQL AQWERLLFNN YVNTAITATF LVLVAIVVIA
NARVWWQLLS GRRAADLHEE KYVAVRVAES PELSV