Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1399 |
Symbol | |
ID | 6205438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1756493 |
End bp | 1758580 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641691041 |
Product | carbon starvation protein CstA |
Protein accession | YP_001818284 |
Protein GI | 182413218 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTACGG TTCCTGCTTC TGTTCGCCCT TGGACTCCCT GGCGCCTGCT TGGTTGGGCC GCGGTCGCAT TGCTCGGAGC GGGCTCGATC GGCATTCTCG CCTGGTCGCG CGGCGAGCCG GTCAACGCGC TCTGGATGGT CGTCGCGTCC GTCTGCGTTT TTGCCATCGC GTACCGGTTC CACTCCGCGT GGTTGATGGC CAAGGTGCTG ACGCTGGACG AACTGCGGGC CACGCCGGCG GTGGTGCACG AGGACGGCAA GGATTTCGTG CAGACCAACC GGTGGGTCGT GTTCGGCCAC CACTTCGCCG CGATCGCGGG GCCGGGGCCG CTCGTGGGGC CGGTGCTGGC GGCGCAATTT GGCTTCCTGC CGGGCATGCT GTGGATCCTG ATCGGCGCGA CGCTCGGCGG GGCGGTGCAC GACAGCGTGA TCCTGTTTTG CTCGGTCCGG CGCGGTGGCC GCTCGCTGGG CCAGATTGTC AGCGACGAGG TCGGCCGGTT CGCAGGCGTC GTCGCGCTGC TGAGCATCGT GGCGATCATG GTGATTCTCA TCGCGGTGCT CGCGCTCGTG GTGGTCAACG CACTCGCGGA AAGCCCGTGG GGCCTGTTCA CGATTGCCGC GACCATGCCG ATCGCCGTGA TCATGGGTTG CGCGATGCGT TACGGGCCGC ACGGCGGCCG CTGGCTCGGT TGGGTGAGCG CGTTCGGCGT CGTTGCACTG CTCGGCTCGG TCTACTGCGG GCAGTTCATG AACCAATGGG GCTGGGCGGA AGCCCTGACC CTCAAGGGCA CGACGCTGGC GTGGTGGATT ATCGGCTACG GCGTACTGGC GTCGATCCTG CCGGTGTGGC TGCTGCTCGC GCCCCGCGAT TATCTGAGCA CGTTCATGAA AATCGGCACG GTCGCCGCCC TCGGCGTGGC GATCGTGCTG CTCGCGCCGG TGCTGAAGAT GCCGGCGCTC ACGCGTTTCG TGGACGGCAC CGGGCCGGTG TTTGCGGGGC CGGTATTCCC GTTCTGCTTC ATCACCATCG CGTGCGCGGC GGTGTCCGGC TTCCACTCGC TGATCGCATC CGGCACCACG CCGAAGCTGC TGACCCGCGA GAGCGATATT CGGGTGATCG GTTACGGCGC CATGATCACG GAGATGCTGG TCGGCATCAT GGCGCTGATC GCCGCATGCA CGATGGAGCC GGGGCAATAT TTCGCCATCA ACATGAAGGG CGAGGCGGCG GCGGTGACCG CGCAGATTAC GCAACTCGGG TTTCCGGTGA CGCCGGCCGA CATGGCGGCG CTCGCAGACG AGGTCGGCGA AAAGACGATG ATTGGGCGAG CCGGCGGCGC GCCGACGTTC GCGGCCGGCA TGGCGCACAT GTTTGCCGGC GTGCTGGGCG GCAAGACCGC ACTCGCGCTC TGGTATCACT TTGCGATCAT GTTCGAGGCG CTGTTCATCC TCACGACGAT CGACGCGGGC ACGCGGGTGG GCCGGTTCAT CGTGCAGGAC CTGCTTGGAC ATGTCTCGAA GCCGCTGAGC AACACGCGCT CGGTTGGCGG CAGCACGCTG GCCACGCTGT TGTTCGTTGG CGCCTGGGGC TGGTTCCTTT ACCAGGGCGT GATCGATCCG CTTGGCGGCA TCAACTCGCT CTGGCCGATC TTTGGGGTCG CGAACCAACT GCTGGCGGTG ATCGCGCTCG CGCTCGGCAC GACGGTCCTG ATCAAGATGG GCCGCACGCG CTACGTGTGG TGCACGCTTG CCCCGTTGGC GTGGCTGCTC GCCGTCACGA TGAGCGCGGG TTGGATGAAG ATTTTTGGCG CGAATCCGCG GCTCGGTTTC CTGTCGGCGG CGCGTGATCT GGCGGCGAAG ATCGCGAGCG GTGGCACGCC GGCGCAGCTC GCGCAATGGG AGCGGCTGCT CTTCAACAAC TACGTCAACA CCGCCATCAC GGCGACGTTT CTAGTGCTGG TGGCGATCGT GGTGATCGCG AACGCTCGCG TCTGGTGGCA GCTGCTCTCC GGCCGCCGCG CGGCGGACCT GCACGAGGAG AAATATGTGG CGGTGAGGGT GGCGGAAAGC CCAGAGCTGA GCGTCTAG
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Protein sequence | MSTVPASVRP WTPWRLLGWA AVALLGAGSI GILAWSRGEP VNALWMVVAS VCVFAIAYRF HSAWLMAKVL TLDELRATPA VVHEDGKDFV QTNRWVVFGH HFAAIAGPGP LVGPVLAAQF GFLPGMLWIL IGATLGGAVH DSVILFCSVR RGGRSLGQIV SDEVGRFAGV VALLSIVAIM VILIAVLALV VVNALAESPW GLFTIAATMP IAVIMGCAMR YGPHGGRWLG WVSAFGVVAL LGSVYCGQFM NQWGWAEALT LKGTTLAWWI IGYGVLASIL PVWLLLAPRD YLSTFMKIGT VAALGVAIVL LAPVLKMPAL TRFVDGTGPV FAGPVFPFCF ITIACAAVSG FHSLIASGTT PKLLTRESDI RVIGYGAMIT EMLVGIMALI AACTMEPGQY FAINMKGEAA AVTAQITQLG FPVTPADMAA LADEVGEKTM IGRAGGAPTF AAGMAHMFAG VLGGKTALAL WYHFAIMFEA LFILTTIDAG TRVGRFIVQD LLGHVSKPLS NTRSVGGSTL ATLLFVGAWG WFLYQGVIDP LGGINSLWPI FGVANQLLAV IALALGTTVL IKMGRTRYVW CTLAPLAWLL AVTMSAGWMK IFGANPRLGF LSAARDLAAK IASGGTPAQL AQWERLLFNN YVNTAITATF LVLVAIVVIA NARVWWQLLS GRRAADLHEE KYVAVRVAES PELSV
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