Gene Oter_1396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1396 
Symbol 
ID6204911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1751804 
End bp1753201 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content66% 
IMG OID641691038 
Producthypothetical protein 
Protein accessionYP_001818281 
Protein GI182413215 
COG category[C] Energy production and conversion 
COG ID[COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain 
TIGRFAM ID[TIGR00273] iron-sulfur cluster-binding protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGC CCATCGACCA GTTCGTCGCT TCGTTGCCGC CTGAGAAGCG TGCTGCCGTC 
TACAGCGGCA CGAAGATCAC GCACGAGAAG CGCACGAAGC TGCTGTTCGA TCACTTCGCC
GATCCGAATC GGCTGCGCCA GCTCGCCGGC GAGATCAAGC AGCACGTCGT GGAAAACCTC
GACACCTACC TGCCGGCGGT GGAAGCGAAG CTTCAGGCCA ATGGCGCGAA GGTGCATTGG
GCCGCGACCG CGGAAGAGGC CTGCGAAGCC GTGCTCCAAA TCATGCAGGC GCGCGGCGCC
ACGAAGATGG TCAAGTCGAA GACCATGGTG AGCGAGGAGA TCGAGCTCGC CGCTTTTCTG
GAGAAACGCG GCATCGAGGC GCTGGAGACC GACCTCGGCG AGTTCATCGT TCAGATCGAT
CACGACCATC CCAGCCACCT CGTCCGGCCG ATCATTCACA AGAACCGCCG CGAGATCGCG
CAGAGCTTCG AGCGCGAGGG ACTCGGCGCC TACAACGACG ATCCGGAGAC GATCACCCGC
CGCGCGCGCG CGTTCCTGCG GCAGAAATAC ATGGCGGCCG ACGTGGGGTT GACGGGGGCA
AACTTCGTCT CGGTGGAAAG CGGCCGGCTC ATCATCGTGA CGAACGAAGG CAACTCGCGG
TTCTGCCTCG CGCCGACGAA GTGCCACATC GCGCTCGTCG GGATCGAGAA ACTCGTGCCG
CGCGACCGCG ACCTCGGTAT TTTCCTGAAC CTGCTCGCCC GCTCCGCCAC GGCGCAGCAA
CTCACCGTCT ACACCGAGTT CATCTCCGGA CCAAAATCCC CGACGCAGCC GGAGGGCCCC
GAGGAGATGC ACGTGATCTT CGTGGACAAT GGCCGCACCA CCGTGCTCGC GTCGGAGTGC
CGCGAGATTC TCCGCTGCAT TCGTTGCGGA GCGTGCCTCA ACGTTTGCCC CGTTTACCGC
CAGGTGAGCG GCCACGCTTA CCGCAGCGTG TATCCCGGTC CGGTTGGCGC CGTGCTCTCG
CCACTGCTCG CCGGCGACCG TTTTCCCGAG CTCGCCGATC TGCCCAAGGC CTCGTCGCTC
TGCGGTGCGT GCCACGAGGT GTGTCCCGTC GACATTCCGA TCCCCGACCT GCTGCTGCGG
CTGCGCGACC GTGGCAAACG CGAGCACGCC GCGCTCGCTG CCGCCGGCAC GCCGCCGATG
GGTGCGTTCG GGGTGCTCGC TTCGCAGCCG GCCGCCTGGA AGGCGGCGCT CGTGGCCGGC
AAGGCGATGA ACTACCTGCC CGCGAGCCTC ATTCCCGTGC CGGCGCTGCA AGCCTGGCAA
AAGGCCCGCA CGCTCCCTCA ATGGCGCGGC GGCGAGTTCA GGAAATGGAT GAAGAACCGC
CCCGGACGAC AACCCTAA
 
Protein sequence
MKQPIDQFVA SLPPEKRAAV YSGTKITHEK RTKLLFDHFA DPNRLRQLAG EIKQHVVENL 
DTYLPAVEAK LQANGAKVHW AATAEEACEA VLQIMQARGA TKMVKSKTMV SEEIELAAFL
EKRGIEALET DLGEFIVQID HDHPSHLVRP IIHKNRREIA QSFEREGLGA YNDDPETITR
RARAFLRQKY MAADVGLTGA NFVSVESGRL IIVTNEGNSR FCLAPTKCHI ALVGIEKLVP
RDRDLGIFLN LLARSATAQQ LTVYTEFISG PKSPTQPEGP EEMHVIFVDN GRTTVLASEC
REILRCIRCG ACLNVCPVYR QVSGHAYRSV YPGPVGAVLS PLLAGDRFPE LADLPKASSL
CGACHEVCPV DIPIPDLLLR LRDRGKREHA ALAAAGTPPM GAFGVLASQP AAWKAALVAG
KAMNYLPASL IPVPALQAWQ KARTLPQWRG GEFRKWMKNR PGRQP