| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1393 |
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| Symbol | |
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| ID | 6206255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1744827 |
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| End bp | 1747259 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641691035 |
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| Product | immunoglobulin I-set domain-containing protein |
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| Protein accession | YP_001818278 |
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| Protein GI | 182413212 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGGCG CTTTGATGCT GGGAGCGGTT TCCGCTCAGC CGCTGCCTAC GCCGACGTTC
ACCAACGTCA CCGTGCACGA TCCCTCCGTC ATCAAGGCCG GCGCCCGCTG GTATGTCTAC
GGCTCGCACG GAGCGTCCGC CTGGACGGAG GACCTGATGC ACTGGACCCA AGTGGCGACG
AGCGTTACGT CGGGCAATCC GGCTCACTTC AACACCTTTG CGAGCGAGCT TTCGGAACTG
ATCGACTGGA CGCACGCAGA CACCCTCTGG GCACCAGACG TCGTCCAGCT GCCGGATGGG
AAATTCTACT ATTACTACGA CGTCTGGACG AATTACCTGA ACTACCGCAG CTACATGGGG
CTGGCTTCGG CCGACGGAAT CGAAGGGCCG TTCACCGATG TGGGCGAGAT CATGAAGGGC
GGCACGAACG TGTCCGGCTT CGACCCCGCC ATCCATCCCA ACACGATCGA TCCGGATGTT
TTCTACGATC GGGATGGCCA GCTGTGGATG GTCTATGGAT CGTACTCGGG TGGCATTTTC
ATTCTCCGGC TCGACCAGAC GGTGGGCTCC GCGACGTTCG GACGTCCGCT CCCCGGCCAG
AGCTGGGGCA CCAAGCTCAT CGGCGGCAAC CATGCGCGGA TCGAAGGCCC CTGCATCATC
TACAGCCCGG AATCGCAGTA CTACTATCTG TTCCTCTCGT TTGGCGGACT CGCGGCGAAC
GACGGCTACA ACATTCGCGT GGCCCGTTCG CGCAATCCCG ACGGGCCGTA TGTCGACGCG
GCGGGCAACG ACCTGAAGAA CGTCGGCGGT TCGGACGCGG CGATCGCACC CTACGGCGTC
AAGCTCATCG GCAACTATCA ATTCGCGCAC GTGGCCGGCG AACCGCGGAA CACCAGTCGC
GGCTACCTCT CACCCGGACA CAACTCCGTC TATCGCGATC CGGCGACGGG GAAGTACTTC
CTGCTGTTCC ACACCCGGTT TGTCGGCTTG GGCGAGACCC ACGAGGTTCG CGTTCACCAG
ATGTTCCTGA ACGCCGACGG CTGGTTCGTG GTCGCGCCGC AACGCTACGC CGGCGAGACG
ATCGCCCCGA TCACCGCGCG GCAGGTGCCG GGCAGCTTCA AGCTGATCAA CCACGGCTGG
GTGATCTCCT CCGCGGTCAA CGGCTCCAGC CTGATCACGC TCAATGCGGA CGGCACGATC
AGCGGTAGCG TGAGCGGCAC GTGGCAAGTG ACGGGGGACA ACAGCGTCAC GCTTTCGTAC
AACGGCGCGA ACTATCGTGG CGTGTTCGTG TTGCAATGGG ACGACGACAA CCAGGTGTGG
ATACTGGGCT TCACGGCGCT TTCCGCGGAC GGCACCGCGA TCTGGGGCAG CAAGGTCGCC
GCGCTCAATG CGGTCGCCGC GCCCGCGCTG ACCGGCACGC CCTCCAGCCA GACAGTCGCA
GCCGGCGGCA CGGCGACGCT GACGGCCGCC GCGAGCGGCG TGCCCGCGCC CGAGCTGCAA
TGGGAGCGGA ACGGTTCCGC CGTCGTTGGC GCGAACAGCA CCGTGCTCAC GCTCGCGAAC
CTCGCGCCCG CCGATGCGGG AATCTACACG ATCGATGCGT CGAATTTTGC GGGCAGCGCT
CCGAGCGCGC CGGCGATTGT GGGCCTGACC TCCGCCGCGA AAGTGATCGG CACGGGCGAG
GAGCTGACGC CGGTGGATAT CCATCATCCG AACGGAAACA TTTTCGACCA GGTGCTGCTG
ACCGGTGCGG CAGAAACCAT CACGGCCGAT GCGGGCCAGG TCACTCGGAC GTCCTATATC
GACCTCGACA ACGACATCGT GCAGGTCGAG TTCAGCGGTC CGGGTTCGCT ATCGCTGGTG
CTGGACAACG CCTCCGGCCG GGCGAAGCCG GAGAACTACA ACCAGGACAT CGACTACATG
AAGGGCCACG CGGGGATCGT CATCACTGGC GCCACGGAAA ACACACATGT GTCGGTCTTC
TCAGTGGGCC GGGCGACGGC GGTGAACCAG GCGCTGTTCA AGGACACGGT AAACTACGAC
GGAATCGCGG ACATCGCGTT CATTGCCATC TCGTCGTCGA ACGGCCGGTT CGGTGGCGTG
CGCACCGCGA ACGCGAACTA CTTCGCGTCG CGCGGCGTGA CCGGCGTGTA CGCACCCGGC
GTGGCGTTCG ATGGACCGGT GTTCGTCGGC AACATCACCG CGTTCGATGC TGCGCAGCCG
AAAATCGTGC TGGGTTCGGT CAGCGATGCG CGGATCGCCG GCGGCGATCT GTATCAGGAC
AATGGTGCTG CGGTGCAGGT GAGCGGGATC ACCCAGCTGA AGTTCACGAA CGGTTCCGAT
TCTCACGGCA ACACGATCCT GGCCAAAGCC AACCGCGCCG TGCTGCAGGA AAACGGTGAG
GACGTCACCA ACCGGATCGT CACGGGACCA TAG
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| Protein sequence | MLGALMLGAV SAQPLPTPTF TNVTVHDPSV IKAGARWYVY GSHGASAWTE DLMHWTQVAT
SVTSGNPAHF NTFASELSEL IDWTHADTLW APDVVQLPDG KFYYYYDVWT NYLNYRSYMG
LASADGIEGP FTDVGEIMKG GTNVSGFDPA IHPNTIDPDV FYDRDGQLWM VYGSYSGGIF
ILRLDQTVGS ATFGRPLPGQ SWGTKLIGGN HARIEGPCII YSPESQYYYL FLSFGGLAAN
DGYNIRVARS RNPDGPYVDA AGNDLKNVGG SDAAIAPYGV KLIGNYQFAH VAGEPRNTSR
GYLSPGHNSV YRDPATGKYF LLFHTRFVGL GETHEVRVHQ MFLNADGWFV VAPQRYAGET
IAPITARQVP GSFKLINHGW VISSAVNGSS LITLNADGTI SGSVSGTWQV TGDNSVTLSY
NGANYRGVFV LQWDDDNQVW ILGFTALSAD GTAIWGSKVA ALNAVAAPAL TGTPSSQTVA
AGGTATLTAA ASGVPAPELQ WERNGSAVVG ANSTVLTLAN LAPADAGIYT IDASNFAGSA
PSAPAIVGLT SAAKVIGTGE ELTPVDIHHP NGNIFDQVLL TGAAETITAD AGQVTRTSYI
DLDNDIVQVE FSGPGSLSLV LDNASGRAKP ENYNQDIDYM KGHAGIVITG ATENTHVSVF
SVGRATAVNQ ALFKDTVNYD GIADIAFIAI SSSNGRFGGV RTANANYFAS RGVTGVYAPG
VAFDGPVFVG NITAFDAAQP KIVLGSVSDA RIAGGDLYQD NGAAVQVSGI TQLKFTNGSD
SHGNTILAKA NRAVLQENGE DVTNRIVTGP
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