| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1386 |
|---|
| Symbol | |
|---|
| ID | 6206490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 1734525 |
|---|
| End bp | 1735679 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641691028 |
|---|
| Product | aldose 1-epimerase |
|---|
| Protein accession | YP_001818271 |
|---|
| Protein GI | 182413205 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2017] Galactose mutarotase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.466174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA TCCTGCGGCT GGTCTGTTCC AGTGTTGCTG TCCTGCAGCT TGCGGTTCCG
CTGCTCACCG CGGCGCCTTC CTCTCCTGTC ATTACCATGA AATCATTCGG TCAACTGCCG
GACGGTCGGC AGACCCATCT GTACACGCTC GAGAACGCCA GCGGGTTTCG CGCCGACATC
ACCGACCTCG GTGGCATCGT CGTGAACCTG CTCGTGCCGG ACAAGAACGG CCAGCTGGCG
GACGTGTCGC TCGGCTTCGA CAACGCCGCG CAGTATTTGA AGGAGTCGCC GTTTTTCGGC
GCGCTGATCG GCCGCTATGG CAACCGGATC GCGCACGGGA AGTTCACGCT CGACGGGCAG
ACGTATTCGC TGCCGCTGAA CGACAAGCCC GGTGACATCC CGTGCTCGCT CCATGGCGGC
ACGGTGGGCT TTGACAAGGT GCTCTGGCAG GGGCGCCCGC AGATCATCGA TGGCAACCCG
GCGCTGGTCC TCACCTATGT CAGCCGCGAC GGCGAACAGG GTTACCCCGG CACGCTCACC
GTCGAGGTCA CCTATACGGT CACGCCAAAG AACGAGCTCC GGATCGATTA CTCGGCGACC
ACCGACAAGG CGACGCCGGT CAACCTGACG AACCACACAT ATTTCAACCT GCACGGCGAG
GGCGAGGGCA CGATTCTCGA CCACGTGCTG ATGATGAAGG CGGCGAAGAC CACGCCGGTG
AACGCGGGGC TGATCCCGAC CGGCGAGATC GTGTCGGTCG CGGGCACGCC GCTCGACTTC
ACGAAGCCAC ATGTGATCGG CGAACGGATC GATGCGGACA ATGAGCAGCT GAAGTTCGGC
GGCGGCTACG ACCACAATTG GGTGCTCGAC AACCAGGACG GGAAGCTCGC GCTGGCCGCC
ACGGTGCACG AGCCGCAGTC GGGCCGGTTC ATGGAAGTGT TCACGACCGA ACCGGGCCTC
CAGTTTTACT CGGGCAATTT CCTCACCGGC GCGATCACCG GCAAGAGCGG GAAGAAGTAT
CCGCATCGCA GCGGGCTGTG CCTGGAGACG CAGCACTATC CCGATTCGCC GAATCAACCG
GCCTTCCCGA GCACCATCCT GCGGCCGGGC AAGAAACTCA CGAGCACGAC GGTCTATCGT
TTTAGCACCA AATAG
|
|---|
| Protein sequence | MKNILRLVCS SVAVLQLAVP LLTAAPSSPV ITMKSFGQLP DGRQTHLYTL ENASGFRADI
TDLGGIVVNL LVPDKNGQLA DVSLGFDNAA QYLKESPFFG ALIGRYGNRI AHGKFTLDGQ
TYSLPLNDKP GDIPCSLHGG TVGFDKVLWQ GRPQIIDGNP ALVLTYVSRD GEQGYPGTLT
VEVTYTVTPK NELRIDYSAT TDKATPVNLT NHTYFNLHGE GEGTILDHVL MMKAAKTTPV
NAGLIPTGEI VSVAGTPLDF TKPHVIGERI DADNEQLKFG GGYDHNWVLD NQDGKLALAA
TVHEPQSGRF MEVFTTEPGL QFYSGNFLTG AITGKSGKKY PHRSGLCLET QHYPDSPNQP
AFPSTILRPG KKLTSTTVYR FSTK
|
|---|
| |