Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1378 |
Symbol | |
ID | 6205946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1725890 |
End bp | 1726633 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641691020 |
Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
Protein accession | YP_001818263 |
Protein GI | 182413197 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0342857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCTT TCGCCATTGC CGCTGCCCAG ATCGCCTCCG TCGCCGGCGA TGTATCGAAG AACATCGAAA CGCACGCCCG CGCGATCCGC GCCGCCGCGC AGCACGGCGT CCGCGTGCTG GTGTTTCCCG AGCTCTCGCT CACCGGCTAC GAGCCGACGC TCGCCGCCGA GCTCGCGTTC ACGCGCGACG ACCCACGGCT CGCTCCCCTC GCCGAACTTG CGCGCGAACA CCACCTCACC GCGATCGTCG GCGCCCCGCT CGCCGCGCAG CCGGTGCCTC ACATCGGCGC CTTCGCGCTG TCGGACGCAG CCAGCGTGGC CGTCTACGCC AAGATCCACC TGCATCCCGG TGAGGAGAGT CATTTTTCGC CAGGCAGCAC GCCGCTCGTG CTACCGTGGG ATCCGCACAA GATCGGCGTC GCGATCTGCG CCGACCTCAC GCACGCGTCG CATCCGCGCG CCTGTGCCGC GCTCGGCGCC GACATCTACG CCGCCGGCGT GTGCCTCACC CATCGCGGTT ACGATGCCGA AGCCGAGCTG ATCGCAGGTC ACGCGGCGCG TCATCGGATG CTGGCGGTCA TGGCCAACTA CAACCGGCCC ACCGGCGGCT ACGATGTCGC CGGAAAAAGC GCCGTCTGGT CGCCCGCCGG CCGCCGGCTC GCCTGGGCCG ACCGCAGCGC CGACGCGCTC GTGATCGCCA CGCGAGTCGA AGGCCACTGG CGCGGCACCG TCGTGCGGCT GTAG
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Protein sequence | MSAFAIAAAQ IASVAGDVSK NIETHARAIR AAAQHGVRVL VFPELSLTGY EPTLAAELAF TRDDPRLAPL AELAREHHLT AIVGAPLAAQ PVPHIGAFAL SDAASVAVYA KIHLHPGEES HFSPGSTPLV LPWDPHKIGV AICADLTHAS HPRACAALGA DIYAAGVCLT HRGYDAEAEL IAGHAARHRM LAVMANYNRP TGGYDVAGKS AVWSPAGRRL AWADRSADAL VIATRVEGHW RGTVVRL
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