| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1368 |
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| Symbol | |
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| ID | 6207399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1705090 |
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| End bp | 1707534 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641691009 |
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| Product | permease |
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| Protein accession | YP_001818253 |
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| Protein GI | 182413187 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.654458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTTCT CTGAACTCCT CCAGGATGTG CGGTTCGGCG CTCGCACGCT GCGTAAAAGC
CCGGGATTCA CCACCGTTGC CCTCGCGACC CTCGCGGTGG GGATCGGCGC GAACACCGCG
ATCTTCAGTT TCGTCCACGG CGTCATGCTG AAGCCGCTGC CGTATGCGGA TCCGGAGCGG
ATTGTCCGCG TGCTCGAGAA ACCGCCGGGC GGCGAACGGA ACGGGATCTC CACACTCAAC
TACCTCGACT GGAAAAATCA GAACACGGTG TTCGAGTACA TGGCCGCGCA GACCGGCGGG
TCGGTCACGC TGACCGGCGT GGACGAGCCC ATCCAGCTCC GCGGCCTGCG CGTGTCGGCT
GACTACTTCA GCATTTTTGG CGTGAGTGCG GCACTGGGCC GGACCTTCGC CGCGGGCGAG
GATCAGCCGG GGCAGGATCG GGTCGTCGTG CTCAGCCACG CGTTTTGGCA GGCCCAGTTT
GGCGGCGATC AGACGCTCCT CGGCCGCACC ATCACGCTCG ACGGTCAATC CCACACGGTG
ATCGGCATCC TGCCGGAGTC CTCGGCCTTC GATCGTGGCT GGCCGCAAAT CTGGCGGCCG
CTGGCCTTCG CGCCGGAAAA CCACACGCGA AACTTTCACT GGTTCGGCTC GATGGCGAAG
CTGAAACCCG GCGTCACGCT GCAGCAGGCG CGTGCGAATC TGGACGCGAT CGCCGCGCGC
ATCGCGCAGG ATTTTCCCGA TTCCAACAAA GGCTGGGGCG TCACGATCGA TCCGATCGTC
GAGACGTACG TGGGCAAGGA TCTCAGGCAC TCGATCTATC TGCTGTTTTC CGCGGTCGGC
GCAGTGTTGC TCATCGGCTG TGCGAATCTC GCCAACCTCA TGCTCGTGCG CGGGCTGGCC
CGGGATCGCG AGGTCGCGCT GCGCGCCGCA CTCGGCGCCG GTCGCTGGCG ACTGGTCCGC
CAATTCCTGA CCGAGAGCAT CCTGCTCGCC GGCGCCGGCG GCGCGCTCGG CCTGGGCGTA
GGCTTCGCGA CGATGGTCGC GCTCAAGCAG GTGCTGCCCA AATACACCCT TCCGCCGGAG
GCCAACGTGA CGTTTGATGG CGGCGTGCTG GCGTTCGCCG TCGGCCTCGC GCTGGCGACC
GGGATCATCT GTGGCCTCAT CCCGGCGCTG CAGGCGACGC GCACCGACCT CACCACCGGA
CTGAAACAGG CCGGCGGCGG CGCCAGCGCC AGTCGCGTTC GTCATCGCAT GCGGACCGTG
CTCGTAGTGA GCGAAGTCGC GCTCGCGTTC GTCCTGTTGA CGAGTGCCGG GCTGTTTCTG
CGCAGCTTCG CCAAGCTGCA CGAGGTCGAC TTGGGGTTTG ACTCCAAAAA CGTGCTGACC
GCCCAGCTGC CGATCCCCGC GAACCGGTTC GAGACGGGTG ACGCCCTGAA CACGTACCTG
CGGCAGATTC ATGACGCGGT GGCGGCATTA CCCGGCGTGG AGGAAGTGTC GTTCACCTCC
GCGCTGCCGA TGCGCGGCTG GGGCTACGGC ATGCCGTTTC AGCGCGCTGA CCGGCCGCTC
GTCGATCGCG CCAACCGCAA CGCCTGTTTC TTCAAGATGG TCAGCCCCTC GTATTTCGAG
GCACTCGGGC TGAAGCTGCG CCAGGGTCGC ACCCTGAACG AGCGCGACCG CAAAGGCACC
CCGCCCGTGA CGGTGATCAC CGAGACGATG CGGCGGCGTT ACTTCGGCAA GGAGGATCCC
ATCGGCAAAC GGATCCTGAT CCAGGAAATC GCGTTCGGGC GCACCAGCCT GGGATCCGAA
ATTCCGTGGG AGGTGGTCGG CGTGGTCGCG GACGAGAAGG TCGGTTCGCT CAGTGACAAG
GAAGGCTCGC CCGGGGTCTA CGTCACGCTC GAGCAGAGCG CCACGGCTTA TCTTTCGCTC
GTGATACGCT GCGCCGGCGA TCCCGCGCTG CTGCACCGGC CGATCCGGCA GGCCGTAAAC
AAGATCAATC CGGACCAATC GCTCCCCGAG ATGAAAACGC TCGAGCAGAT CAAGACCGAG
TCGCTCGGCG GCAGCCGGCT GAGCACGATC TTGATCGGAG TGTTCGCCGG TGTGGCCTTG
TTGCTCGCCT CGATCGGAAT CTACGGGGTG ATCTCGTATT CCGTCGCGCA GCGGACGCGC
GAGATCGGCA TTCGCACGGC ACTCGGCGCG GATTCAGGGT CCATCCTGTG GCTCGTGCTC
CGGCACGCGA TGGAGACGGT CCTGCTCGGG ATGCTGATCG GCACGGCCGG AGTATTCGCA
GTCGCCCAAT TGATGACGAC GCTGCTGTTC GGCGTCGGCG AACGTGATCC GCTCACGCTG
CTGGGAGTCG GCGTGATTCT CGGCAGCGTG GCCCTGGTTG CCTGCTTCCT GCCGGCCCGC
CGCGCCGCGC GGCTCGATCC GATCGTCGCG CTGCGGGAAG AGTGA
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| Protein sequence | MMFSELLQDV RFGARTLRKS PGFTTVALAT LAVGIGANTA IFSFVHGVML KPLPYADPER
IVRVLEKPPG GERNGISTLN YLDWKNQNTV FEYMAAQTGG SVTLTGVDEP IQLRGLRVSA
DYFSIFGVSA ALGRTFAAGE DQPGQDRVVV LSHAFWQAQF GGDQTLLGRT ITLDGQSHTV
IGILPESSAF DRGWPQIWRP LAFAPENHTR NFHWFGSMAK LKPGVTLQQA RANLDAIAAR
IAQDFPDSNK GWGVTIDPIV ETYVGKDLRH SIYLLFSAVG AVLLIGCANL ANLMLVRGLA
RDREVALRAA LGAGRWRLVR QFLTESILLA GAGGALGLGV GFATMVALKQ VLPKYTLPPE
ANVTFDGGVL AFAVGLALAT GIICGLIPAL QATRTDLTTG LKQAGGGASA SRVRHRMRTV
LVVSEVALAF VLLTSAGLFL RSFAKLHEVD LGFDSKNVLT AQLPIPANRF ETGDALNTYL
RQIHDAVAAL PGVEEVSFTS ALPMRGWGYG MPFQRADRPL VDRANRNACF FKMVSPSYFE
ALGLKLRQGR TLNERDRKGT PPVTVITETM RRRYFGKEDP IGKRILIQEI AFGRTSLGSE
IPWEVVGVVA DEKVGSLSDK EGSPGVYVTL EQSATAYLSL VIRCAGDPAL LHRPIRQAVN
KINPDQSLPE MKTLEQIKTE SLGGSRLSTI LIGVFAGVAL LLASIGIYGV ISYSVAQRTR
EIGIRTALGA DSGSILWLVL RHAMETVLLG MLIGTAGVFA VAQLMTTLLF GVGERDPLTL
LGVGVILGSV ALVACFLPAR RAARLDPIVA LREE
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