Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1363 |
Symbol | |
ID | 6208709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1697324 |
End bp | 1699087 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641691004 |
Product | hypothetical protein |
Protein accession | YP_001818248 |
Protein GI | 182413182 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3345] Alpha-galactosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.606388 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTGA TCACGCTTCT TCTCCCGCTG ACTTTGGCTT CCGCGGTTCA CGCCGGTGCG CCCGCCTTCC GTTCCTGGGC GCCGACGCCG CCGATGGGCT GGAACAGCTG GGACAACTTT GCCACCACCA TTACCGAAGA GCAGACCAAG CAGCAGGCCG ACTTCATGGC GGCCCAACTG AAATCGCACG GCTGGCAGTA TGTCGTCGTC GACATCCAGT GGTACGAGCC GGGCGCCAAG AGCCACGCCT ACCGCAGCGA CGCCACGCTC ACGATGGACG AGTTCGGCCG GCTGACGCCG GCGCTCAACC GTTTCCCGTC CGCCGCGGAG GGCGCGGGAT TCAAGCCGCT CGCCGACTAC ATTCATTCGC TCGGACTGAA GATGGGGATC CATCTCATGC GCGGGATCCC GCGTCAGGCC GTCGAGAGGA ACCTGCCGGT GAAGGGCACG AGCGTACGTG CACAGGACAT CGCGAATCGC GCCAGCATTT GCCCGTGGAA TCCCGACATG TTCGGCGTCG ATCTGACGAA GCCCGGCGCG CAGGAGTATT ACGACTCCGT GTTCGCGCTG ATCGCCGCGT GGGGCGTTGA CTACGTGAAG GTCGACGACA TCTCGCGGCC GTATCATGAG CACGAGTCGG AGATCGAGGC GATCCGGCGC GCGATCGATC GCACCGGCCG GCCGATCGTG CTCAGCCTGT CGCCCGGCGA AACCGCGCTC ACCGCCGCCG CTCACGTGCG CGACCACGCG AACCTCTGGC GGATCAGCGA CGACTTCTGG GACCGCTGGC TCGCGCTGCG CGACCAATTC GGCCGGCTCG CCGCGTGGAA TCCGCATCGC GTCACGGGCG CCTGGCCCGA CGCCGACATG CTGCCGCTCG GCGTGCTCAA TCTCGGTACG CGCATCACCC GGTTCACGCC GGACGAGCAG CGCACCTTGA TGACGCTGTG GTCCATCGCC CGGTCGCCGC TCATGCACGG CGGCGACCTG ACGAAGACCG ACGACTTCAC GCTTTCGCTG CTCACCAACG ATGAGGTGCT CGCCGTCAAC CAGCAGAGCG AAAACAACCG GCCCCTGTTC GATCGCGATC AACTGATCGC CTGGGTCGCC GACGTGCCGG GCTCCGCCGA CAAATATCTC GCCGTGTTCA ACACCCGCGA TCGCGTCCGC CGCACTCCCG CCAACGCCCG CTATGTCAGC CCGTCCGTGC GCTCCGGTGC CGGCGCAGCC GTCGATGCCG ACGTCACCGG CGGCACCAAG CTCTTCCTCT CCGCCGAGCC GGCCGAAACG AGCGGCGAGT GGAACCGCAT CCTCTGGCGC GCCCCGCGCC TGGTATTCGC CGACGGCAAG GAGCAGCCGT TGACCGAACT CACGTGGGCG CACGCCGACG CCGCCTGGGA CAGCACGGCG GTCAAAAAGG ACGCCGCCGG CCAGCCGATC GGCATCGGCG CGGAGATCCC CGCCTTCGTG GAATTCGCTC TACCGCGGGA TGCCGTCCGG TTCCGCGCGC AAGCGTCCGT CGAGAGCAAC GGTCGCGGCC ACGAGCCCGG ACCGGTTCGC TTTCTCGTTG TGGTCGCCAC CCCGGAAAAC GAAAGCAAAG CCGCCGGTCT GCCGGTGGCC GTGAGTCTGT CCGAGCTCGG ATTGCCGCAA GGCACACACG TCCGCGATCT CTGGGCTCAT CGCGATCTCG GCACCGTCGA ACGCGAGTTC GCGCCGGAAA TTCCCTTCCA CGGCGCCGGG TTGTACCGGC TGTCGCCAAG ATAG
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Protein sequence | MKLITLLLPL TLASAVHAGA PAFRSWAPTP PMGWNSWDNF ATTITEEQTK QQADFMAAQL KSHGWQYVVV DIQWYEPGAK SHAYRSDATL TMDEFGRLTP ALNRFPSAAE GAGFKPLADY IHSLGLKMGI HLMRGIPRQA VERNLPVKGT SVRAQDIANR ASICPWNPDM FGVDLTKPGA QEYYDSVFAL IAAWGVDYVK VDDISRPYHE HESEIEAIRR AIDRTGRPIV LSLSPGETAL TAAAHVRDHA NLWRISDDFW DRWLALRDQF GRLAAWNPHR VTGAWPDADM LPLGVLNLGT RITRFTPDEQ RTLMTLWSIA RSPLMHGGDL TKTDDFTLSL LTNDEVLAVN QQSENNRPLF DRDQLIAWVA DVPGSADKYL AVFNTRDRVR RTPANARYVS PSVRSGAGAA VDADVTGGTK LFLSAEPAET SGEWNRILWR APRLVFADGK EQPLTELTWA HADAAWDSTA VKKDAAGQPI GIGAEIPAFV EFALPRDAVR FRAQASVESN GRGHEPGPVR FLVVVATPEN ESKAAGLPVA VSLSELGLPQ GTHVRDLWAH RDLGTVEREF APEIPFHGAG LYRLSPR
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