| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1362 |
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| Symbol | |
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| ID | 6208678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1695527 |
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| End bp | 1697200 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641691003 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001818247 |
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| Protein GI | 182413181 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3664] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.938738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAC TCCTCTCCCT TTTCTCGGCG GTCTGTTTCG CGTCGCCTCT CTTCGCCGCG
GACGCTCCTT TCCCCGTTTC CGTCACCGTC GACGCCGCGC ACTCGCTCGG GCCACTCAAG
CCCGTCTGGC GATTCTTCGG CGCGGACGAG CCGAACTACA CGACGATGAA GGACGGCCGC
CGGCTGCTCG GCGAACTCGG CACCCTCCGG CCCGGTGAGG TCTATTTCCG CACCCACAAC
CTGCTCACCA GCGGCGATGG CACGCCGGCG CACAAATGGG GCAGCACGAA CGCCTACACC
GAAGACGCCG CCGGCCGACC TGTGTACGAC TGGACGATCG TCGACCGGAT TTTTTCCACC
GGGCTGGCGC GAGGCGTGCG GCCGTACGTC GAGATCGGTT TCATGCCGCA GGCGCTGTCG
ACGCACCCGG AACCTTATCA GCACGAGTGG CGTGCCGGCT TGCCTTACGA GCGGATCTAC
ACCGGCTGGG CTTATCCGCC CAAGGATTTC GAAAAATGGG GCGAACTCGT TTACCAGTGG
GCGAAGCACT GCGTGGAAGA ATTCGGCGCG GCCGAGGTCG AGCGCTGGTA TTGGGAAACC
TGGAACGAAG CCAACATCCC TTACTGGCAG GGCACCCCCG AAGAGTTCAT CAAACTGCAT
GACTACGCGA TCGCCGCGGT CCGCCGCGCA CTGCCCACGG CGCGGGTCGG CGGACCCGAT
TTCGCCGGAC ACGGCGGCCC GCGGATGCAC GAGTTCCTCG AGCACTGCCT GCGCGGGAAA
AATCATGCGA CCGGCGAGAC CGGCACGCCG CTCGATTTCA TTTCGTTTCA CGCCAAAGGC
TCGCCGGCGT TCGTCGACGG GCACATTCGG ATGGGCATCG CGCCGCACCT GCGCACGCTC
GACGAGGGCT TCGCGATCGT TGCGTCCTAT CCGGAGCTGA AGGCGAAGCC GATCGTGATC
GGCGAGTCCG ATCCCGAGGG CTGCGCCGCG TGCATGGGCG GGCAGTTCAC GTATCGCAGC
GGCACCGTGT ACTCGAGCTA CACGGCGGCG AGTTTCGCGC GCAAATACGA TTTGGCGGCG
AAGCACGGCG TGAATCTCGA GGGCGTGCTC ACCTGGGCGT TCGAGTTCGA GGATCAGCCG
TATTTCGCCG GCCAGCGCGT GCTCTCCAGC AACGGCATCG CCCTGCCCGT GCTGAACGTC
TTTCGGATGT TCAGCCGGCT CGGCACCGAG CGCGTCGCGG CGGAAAGCTC GGGCGCGATC
CCCCTCGACG ACATTCTCCG GCAGGGCGTC CGCCGCGCGC CGGATGTGGG CGCGTTCGCC
AGTCGCGACG CGCATCAGGT CGCGGTCGTG CTATGGCATT ACCACGATGA CGACGTCGCC
GGCCCCGATG CCGCGGTGGA GTTCGCCGTG CGCGGTCTGC CCGACACGCT CCGCACCGCC
CGCGTGAGTC ACGCTCGAAT CGATGCGACG CACAGCAACG CCTTCGCCGA GTGGAAGCGG
ATGGGCACCC CGCTGGCGCC GAACCAACAG CAGTACGATG CACTGCAACG GGCCAGCCAG
CTCGCGCAGC TGGCTGAGTC GCCTGCTTCC GTCGCCGTCG AGAGTGGTGT GGCGACGCTG
CATTTCGCGC TGCCGCGGCA GGCCGTGTCG CTGGTCGTGC TCGAATGGGA GTGA
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| Protein sequence | MKRLLSLFSA VCFASPLFAA DAPFPVSVTV DAAHSLGPLK PVWRFFGADE PNYTTMKDGR
RLLGELGTLR PGEVYFRTHN LLTSGDGTPA HKWGSTNAYT EDAAGRPVYD WTIVDRIFST
GLARGVRPYV EIGFMPQALS THPEPYQHEW RAGLPYERIY TGWAYPPKDF EKWGELVYQW
AKHCVEEFGA AEVERWYWET WNEANIPYWQ GTPEEFIKLH DYAIAAVRRA LPTARVGGPD
FAGHGGPRMH EFLEHCLRGK NHATGETGTP LDFISFHAKG SPAFVDGHIR MGIAPHLRTL
DEGFAIVASY PELKAKPIVI GESDPEGCAA CMGGQFTYRS GTVYSSYTAA SFARKYDLAA
KHGVNLEGVL TWAFEFEDQP YFAGQRVLSS NGIALPVLNV FRMFSRLGTE RVAAESSGAI
PLDDILRQGV RRAPDVGAFA SRDAHQVAVV LWHYHDDDVA GPDAAVEFAV RGLPDTLRTA
RVSHARIDAT HSNAFAEWKR MGTPLAPNQQ QYDALQRASQ LAQLAESPAS VAVESGVATL
HFALPRQAVS LVVLEWE
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