| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1356 |
|---|
| Symbol | |
|---|
| ID | 6204290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 1685568 |
|---|
| End bp | 1687226 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641690997 |
|---|
| Product | GDSL family lipase |
|---|
| Protein accession | YP_001818241 |
|---|
| Protein GI | 182413175 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCCC GTCTCCTCTC CCTTCTCGCC CAGATTCTCG GCGGGCTCAC CTGCGGGCTC
GCCCTGGCGG CGTTTGCACA AACCCAATCT CCCGCGCCTG CCACGCCGGC GCCTGATCTC
GCGAAAAATC CCGCGGCGGT CGCGACACCG CTGAATCCGG CGTTGCCGAC CGTGTTCATC
GCGGGCGATT CGACGGCGGC GAAGAACAAT GCCGATCCGG TGCAGGGCTG GGGCGTGCCG
TTCGCCGACT ACTTCGATCC GGCGAAGCTC AACGTGGCGA ATCGCGCGCG CGGCGGTCGT
AGCAGCCGGA CGTTTATCAC CGAAGGCTTG TGGGACCAGT TGCTCGCGGA GGTGAAGGCC
GGCGATTTCG TGCTGATCCA GTTTGGTCAC AACGACGGCG GAGCGATCAA CGAGGAGCCG
CCAGGCTCGA CGCGACCGCT GCGCGCGCGC GGCTCGCTGC CGGGTGTGGG CGAGGAGTCG
CAGGAGATCG ACAACGTGCT CACGAAAAAA CACGAGGTGG TGCACACGTT CGGTTGGTAT
CTGCGCAAGA TGATCGCGGA CCTGCAGGCG AAGGGCGCGA CGCCGATCGT GCTGTCGCCC
ACGGTGCGCG CCATTTGGAA GGACGGGAAA GTTGAGCGCG GCGCGCCCAA CGCGCATCGC
GCGTGGAGCC GCGAGGTCGC GCAATCGGCC GGGGTCGCGT TTGTCGACGT CACCCGGATC
ATCGCCGACC GTTACCAGCA GCTGGGCGAA GCGCAGGTGA AGGCGTTGTT CGGGCCGGAT
CACACGCACA CGAACGTTGC CGGCGCCGAG CTGACGGCGG CCAGCGTGGT CGCGGGATTG
AAGGGGCTGC GCCAGGGACC CTGGGCGCCG TTTCTCTCGG CGAAAGGCCA GGCCGTCGAA
GCGGACGCGA TCGGCTGGCT CAACCTGCCC GAGCCGGCGA ATCCCGAACT GCCGTCGCTC
GTGCTGATCG GCGACTCGAC GGTGCGCAAC GGCCGCGGCG ACGGCGACAA GGGCCAGTGG
GGCTGGGGCG AGCCGCTAGC CGGATTGGTC GATCCGGCGA AACTGAACGT CGTGAACCGC
GCGATCGGCG GCTTGAGCAG CCGGACCTTT TTGACGCAGG GACACTGGGA GCGCGCACTC
ACGCTGATGA AACGCGGCGA TTTTTTGATC ATGCAGTTCG GGCACAACGA CAGCGCGGCG
TTGAACGACA CCTCGCGCGC TCGCGGCACG ATCAAGGGCG TGGGTGAGGA GACGGAGAAG
ATCGACAATC TGCTGACGAA AAAACACGAG GTGGTTCACA CGTATGGCTG GTATCTGCGG
CATTACGTGC GCGAGGCGAA GGAGCGCGGG ATCACGCCGA TCATCTGTTC GCCCGTTCCG
CGCAAGACAT GGAAGGAGGG CCGCATCGTG CGCTCCGCCG ACAGTTATGC CGGCTGGGCC
AAGCAGGTCG CGGAACGGGA GGGCGTGGCC TTCATCGATC TCAACGAACT CGTCGCGCAG
CGCTACGACC AGCTCGGCGC GGAGAAAGTC GACGCGCTGT TTGCGGACGA GCACACGCAC
ACCAGCCGGC TGGGTGCGGA ACTGAACGCC GCGATCGTGG CGGAGGCGCT GCGCGCGATG
CCAGACGTGC GGCTGAAGGA GGGGTTGCAG TCGCTGTAG
|
|---|
| Protein sequence | MNSRLLSLLA QILGGLTCGL ALAAFAQTQS PAPATPAPDL AKNPAAVATP LNPALPTVFI
AGDSTAAKNN ADPVQGWGVP FADYFDPAKL NVANRARGGR SSRTFITEGL WDQLLAEVKA
GDFVLIQFGH NDGGAINEEP PGSTRPLRAR GSLPGVGEES QEIDNVLTKK HEVVHTFGWY
LRKMIADLQA KGATPIVLSP TVRAIWKDGK VERGAPNAHR AWSREVAQSA GVAFVDVTRI
IADRYQQLGE AQVKALFGPD HTHTNVAGAE LTAASVVAGL KGLRQGPWAP FLSAKGQAVE
ADAIGWLNLP EPANPELPSL VLIGDSTVRN GRGDGDKGQW GWGEPLAGLV DPAKLNVVNR
AIGGLSSRTF LTQGHWERAL TLMKRGDFLI MQFGHNDSAA LNDTSRARGT IKGVGEETEK
IDNLLTKKHE VVHTYGWYLR HYVREAKERG ITPIICSPVP RKTWKEGRIV RSADSYAGWA
KQVAEREGVA FIDLNELVAQ RYDQLGAEKV DALFADEHTH TSRLGAELNA AIVAEALRAM
PDVRLKEGLQ SL
|
|---|
| |