| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1350 |
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| Symbol | |
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| ID | 6206607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1670541 |
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| End bp | 1672841 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641690991 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001818235 |
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| Protein GI | 182413169 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACG CCCGCTCCTC TGCTCCGCCG CTGCCCGCCC GGCGCGGGGG CGCGCGTCGC
TGGCTGGGGT TCGGCGCGGC GCTGCTGGCG CTGGTGGCGT TCGTCTATGC GCCGACGTTG
TCCGCGCCGT TTCACTTGGA CGACGCGGAG TCGATCGTGG GCAATGCGAC GCTCCGCGAT
TTCTGGTCGT TCGCGTGGGC GAAGCCGCCG GCCACCGGCG GCGAGACGGT GAGCGGCCGG
CCGGTGCTCA ACTTCACGTT TGCGCTCAAC CAAGCCTGGG GCGGACTCGA CGTGCGTGGT
TATCATGTCG TCAACGTCCT GATCCACGCG CTCGCCGCGC TCGTGCTGTT TGGCGTGGTG
CGGCGAGGCC TCGCCTTGGC CCGCGGCCGC GCCGCGAAGA GCGCGGTCGC TCCTGTCTCC
GCGACGACGC TGGCCGGCGA ATGTTCGTAC TACGAACATT GGCGGGAGAG TGGGATCGCG
TTTTTCGTGG CGGCGCTGTG GGCGGTACAT CCGCTGCAAA CGAGCGCGGT AAGCTATGTC
GCACAACGCG CCGAGTCGCT GGCGGGGCTG TTTTATTTGC TGGTGCTGTA TGGGTTCATC
CGCGGCGCGG AAGCGGCTGG CTCCGGCGGT GGTGCCGTGG TTCAGGTTCA CAGGCGCGAT
GCCCGTGCCC CGGCAACGGG TGCACGATGG TTCACGTTCT CGGTTGCAGC CTGTCTGCTC
GGCGTGGGCA CGAAAGAGAC GATCGTCACG GCGCCGCTCG TGGTGCTGCT CGCGGATCGC
GCATTCGTGA CCGGCGGCTT TGCTGCGGCG TGGCGCGCGC GCCGGCGGTA TTACCTCGCG
CTTGCTGCCA CTTGGCTCGT GCTCGGCGCG TTGGTGGTGG CAAATCGCGG CCGTGGCGGT
TCGGCGGGAT TCGGTGCGAG CATCACCTCA TGGGAATATC TGGTGACGCA GGCCGGGGCG
GTCGGGCACT ACTTGCAATT GGTGTTTTGG CCGACGGGGC AGGTATTCGA CTACGGCGTG
GCGCTCGCGC CGCTGGCGGC GGTGTGGCCG CAAGCGCTGC TCCTGCTCGG GCTCGCGGGC
GTGGGGTTCT GGCTGCTCGC GCGCAACCAG GCGGGTGGTT TTCTGATCGC GAGCTTTTTC
CTTCTCTTGG CGCCGAGCTC GAGTCTCGTG CCGATCGCCA CGCAGACTGT GGCCGAGCAT
CGGATGTATT TGGCGTCGGC GGTGGTGATC GCGGCGGTCG CGTTCGGATG CTGGCGCGCG
ATGCAGCGGC TGGCCTCGTC GCGGACTGGC GCTTGGGTCA CGAGTGCCGC TCTGGGAGCG
GCGGTCCTGG CGCTGGGAGT GGCGGCCCAT GGGCGCAACC AGCTCTATCG CTCGGAGCTC
GCGCTCTGGC AGGACACGGT GGCGAAACGG CCGGACAATC CCCGCGCTCA TCACAACTTC
GGACTGGCGC TCGCCGCCGC CGGGCGGAGC GACGAAGCGA TGGCCGAGTT TCGTCGCGCG
ATCGCGCTGC AGCCGAACCA TGTTTTTGCG CATACCCAGC TCGCATTGGC GTTGCTCGAT
CGCGGCGAAC CGGAGGCGGC GAGCGCGCAT TTCCGCGCCG CGTTGGCGGC TGATCCGAGC
TATGCCGCGG CGCGGGTGAA TCTCGGCCGC GCGCTGGCGC GGCTCGGTCG CACCGACGAG
GCCGCGACGG AATACGAGGC GGTGCTCCGC GCTGAGCCGG GGGCCGTCGA TGCGGGCACC
AATCTCGCTG CGCTACTGCT GGCACGCGGT GAGACCGAGC GCGCGGCCGC GCTGCTCGCC
GCGGCAACCG CCGCGGCCCC CGCGCTGGCG GAACCACATT ACCACTACGG GCTCGCGCTC
GAGCAGTTGG GTCGGATCGC TGAGGCCGAA AGCGCGTTGC GTCAGGCCAC CGAGCTGAAG
CCGGACTGGG CCGAGCCGTG GCTGGCCCTG GGGAACGTGC TCGCGCGGCG CGGCGAGGCG
GAGCCGGCGG AGCGCGCCTA TCGTTCCGCG CTCCACCTCG CACCGCGAAC CGCGGCGGCG
CACTATGGCT TGGGCAACCT GCTCGCGCAG CGGCGCAATT TTCGCGCAGC GATGGAAGAG
TTCCAGGCGG TGCTGGCAAT CGATCCCGCC CATGTGCCGG CGCGCAACAA TCTCGGCAAC
TGCCAGCTCG TGACCGGTCA GCTGCGCGAA GCCGTCGCGA CGTACGAGGA AGTGTTGCGG
GCGCGACCGA ACGATGCCGC CGTCGAGCGG AACCTCGCCC TCGCGCGGGA ACTGCTGCGC
AGCGGCGGGC ACGGGCCCTA G
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| Protein sequence | MPDARSSAPP LPARRGGARR WLGFGAALLA LVAFVYAPTL SAPFHLDDAE SIVGNATLRD
FWSFAWAKPP ATGGETVSGR PVLNFTFALN QAWGGLDVRG YHVVNVLIHA LAALVLFGVV
RRGLALARGR AAKSAVAPVS ATTLAGECSY YEHWRESGIA FFVAALWAVH PLQTSAVSYV
AQRAESLAGL FYLLVLYGFI RGAEAAGSGG GAVVQVHRRD ARAPATGARW FTFSVAACLL
GVGTKETIVT APLVVLLADR AFVTGGFAAA WRARRRYYLA LAATWLVLGA LVVANRGRGG
SAGFGASITS WEYLVTQAGA VGHYLQLVFW PTGQVFDYGV ALAPLAAVWP QALLLLGLAG
VGFWLLARNQ AGGFLIASFF LLLAPSSSLV PIATQTVAEH RMYLASAVVI AAVAFGCWRA
MQRLASSRTG AWVTSAALGA AVLALGVAAH GRNQLYRSEL ALWQDTVAKR PDNPRAHHNF
GLALAAAGRS DEAMAEFRRA IALQPNHVFA HTQLALALLD RGEPEAASAH FRAALAADPS
YAAARVNLGR ALARLGRTDE AATEYEAVLR AEPGAVDAGT NLAALLLARG ETERAAALLA
AATAAAPALA EPHYHYGLAL EQLGRIAEAE SALRQATELK PDWAEPWLAL GNVLARRGEA
EPAERAYRSA LHLAPRTAAA HYGLGNLLAQ RRNFRAAMEE FQAVLAIDPA HVPARNNLGN
CQLVTGQLRE AVATYEEVLR ARPNDAAVER NLALARELLR SGGHGP
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