Gene Oter_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1312 
Symbol 
ID6207068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1622611 
End bp1623372 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content66% 
IMG OID641690953 
Producthypothetical protein 
Protein accessionYP_001818197 
Protein GI182413131 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCA GCTTCTGGCA CTACGCGCTC CTTTTCGTGG TCGGCCTCGT GGCCGGCACG 
GTGGATGCCG TAGCGGGCGG CGGCGGGTTG ATCACCGTGC CCGCATTGCT GAACCTCGGG
CTGCCCGTGC CGCTCGCGCT CGGGACGAAC AAGTTTCAAT CGAGCTTCGG CAGTGTCTCC
GCCTCGGTGC ACTTCGTCCA GCGCCGCGCC GTCCGGCTCT CCGAATGTTG GTTCGGCATC
ACCGCGACGC TGATTGGCGC CTTTCTCGGC GCGTTCGCCG TCCAGCAAAT CGACGCCGAT
CTGCTGAAGC ACGTCGTGCC CTGGCTGCTC GCCGCAATCC TGCTCTACAC GCTGCTTCGG
CCCGCGATCG GCACGCAAGA TCATCCGCCC AAAATGAGCA CCGGCGTCTT CTACGGCGTG
TTCGGCCTCG GGCTCGGATT CTACGACGGC TTCTTTGGCC CCGGCACCGG ATCGTTTTGG
GCCATCGCGC TGGTGCTGTT GCTCGGGCAA AACTTCACGC GCGCCACGGC CACGACGAAG
GTGATGAACG CCACCAGCAA CGTCGCCTCA CTCGCGCTGT TCGCCGTCGC CGGACTCGTG
CATCTCGGCG CGGGGGTGGC GATGGCTGCC GGTCAGCTCA TCGGCGGCCG GCTCGGCGCG
CATTTGGTCA TGACGCGCGG CGCGCGGTTC ATCCGCCCCG TGTTCCTCAC GATGGTGACG
CTCACTCTCG CGCGGTTGCT CTGGGTCAAT TACGCCCGCT GA
 
Protein sequence
MDLSFWHYAL LFVVGLVAGT VDAVAGGGGL ITVPALLNLG LPVPLALGTN KFQSSFGSVS 
ASVHFVQRRA VRLSECWFGI TATLIGAFLG AFAVQQIDAD LLKHVVPWLL AAILLYTLLR
PAIGTQDHPP KMSTGVFYGV FGLGLGFYDG FFGPGTGSFW AIALVLLLGQ NFTRATATTK
VMNATSNVAS LALFAVAGLV HLGAGVAMAA GQLIGGRLGA HLVMTRGARF IRPVFLTMVT
LTLARLLWVN YAR