| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1301 |
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| Symbol | |
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| ID | 6205348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1611417 |
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| End bp | 1612688 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641690942 |
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| Product | L-rhamnose isomerase |
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| Protein accession | YP_001818186 |
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| Protein GI | 182413120 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4806] L-rhamnose isomerase |
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| TIGRFAM ID | [TIGR01748] L-rhamnose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.889587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCG CCAAAGCTAT TTCCGCCGCC TACAAACTCG CCCGAGACGC CTATGCCGAC
CTTGGCATCG ACACCGAAGC CGCCATCAAG CGCGCGCTCT CTCTCCCGAT CTCGCTCCAT
TGCTGGCAGG CGGACGACGT GCGCGGACTC GAGACGCCGA AGCCGGGACT CGATTCTGGC
GGGATCATGG CGACCGGCGG TTATCCGGGC CGGGCGCGCA ATGGCGACGA GATGCGCGCC
GATCTCGACC TCGTGTTGAA CCTCCTTCCG GGCAAACAGC GGCTCAACCT GCACGCGTTC
TACGCCGAGA CCGGCGCCGC CCACGTCGAT CGCGATGAGA TCGAGCCGGA ACATTTCGCC
CGCTGGCTCG CGTGGGCAAA TTCACGCCGC GTGGGGCTCG ACTTCAATCC GACCTACTTC
GCGCACCCGC ACGCCACCTC GGGCTTCACG CTTTCGCATC CGGACAAAGC GATCCGCAAG
TTCTGGATCA ACCACGCGAA GGCCTCGCGC CGGATCGCGC AGCATTTCGC CAAAAATCTC
GGCACTCCCT GCGTGAACAA CCATTGGGTG CCGGATGGCG CCAAGGATGC GCCGGCCGAC
CGCTGGGCGC CGCGCGCACG CCTCGTCGAA TCCTACGATG CCATTTTTGC CGACAAATCG
ATCAACCGGA AGCTCTGCGT CGATGCCGTC GAAGGAAAAC TCTTCGGGCT CGGCAGTGAG
GATTACGTCG TCGGCTCGCA GGAATTTTAT TCGTCCTACG CGCAGTCACG CGATCTCGTG
CTCTGCCTCG ATCTCGGGCA TTATCATCCG ACCGAGTCGG TCGCGGACAA GGTTTCCGCG
CTGATGCAGT TCCACGATCG GATTCTCCTG CACACGTCGC GGCCGATTCG CTGGGACAGC
GATCACGTCG TCATCCTCGA CGACTCCACG CGCAATCTCT TCCTCGAGAT CGCGCGCGGC
AACGCGTGGG ATCGCGTCTT CGTCGCGCTG GATTTCTTCG ATGCGTCGAT CAACCGGATC
GCCGCGTACG TGATCGGCGC GCGCGCCACC CGGCAGGCGA TTTTGCTCGG GCTGCTCGAT
CCCTCGCAGC AGCTGCGCGA GGCCGAAACC GCCGGCCGGG GTCATGAGCG GCTCGCGCTG
ATGGAGCAGG CGAAAGCGCT GCCGTGGGGC GCCGTGTGGG ACGAACTCTG CGTGCGCGAC
GACGTGCCCG CCCGCGCCGA TTGGCTCGCC GCCGTCGCGC GCTATGAACG GGACGTGCTG
GCGAAGCGGT AG
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| Protein sequence | MSSAKAISAA YKLARDAYAD LGIDTEAAIK RALSLPISLH CWQADDVRGL ETPKPGLDSG
GIMATGGYPG RARNGDEMRA DLDLVLNLLP GKQRLNLHAF YAETGAAHVD RDEIEPEHFA
RWLAWANSRR VGLDFNPTYF AHPHATSGFT LSHPDKAIRK FWINHAKASR RIAQHFAKNL
GTPCVNNHWV PDGAKDAPAD RWAPRARLVE SYDAIFADKS INRKLCVDAV EGKLFGLGSE
DYVVGSQEFY SSYAQSRDLV LCLDLGHYHP TESVADKVSA LMQFHDRILL HTSRPIRWDS
DHVVILDDST RNLFLEIARG NAWDRVFVAL DFFDASINRI AAYVIGARAT RQAILLGLLD
PSQQLREAET AGRGHERLAL MEQAKALPWG AVWDELCVRD DVPARADWLA AVARYERDVL
AKR
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