Gene Oter_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1293 
Symbol 
ID6207443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1603882 
End bp1604175 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content69% 
IMG OID641690934 
Productmicrocompartments protein 
Protein accessionYP_001818178 
Protein GI182413112 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.542399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAAC CCGCCCTCGG TCTCCTCGAA ACGCGCGGTC TCACGGCGCT CGTCGCCGGT 
ACCGACGCCA TGCTCAAGTC TGCCAACGTC ACGCTCGTCG GTCCGATGAA ACAGGTCGGC
AACGCGCTCG TGACCGCGGT TGTCACCGGC GATGTCGCCG CCGTCAAGGC CGCGACCGAA
GCCGGCGCCG CCGCCGCCCG CCAATACGGC GAGGTCGTCA CCGTGCAGGT GATCGCCCGG
CCGCACGACG ACATCGCCAG CGTTCTCCCG AAAGCGCCCG CTGCCAAAAA GTGA
 
Protein sequence
MSQPALGLLE TRGLTALVAG TDAMLKSANV TLVGPMKQVG NALVTAVVTG DVAAVKAATE 
AGAAAARQYG EVVTVQVIAR PHDDIASVLP KAPAAKK