| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1290 |
|---|
| Symbol | |
|---|
| ID | 6205499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 1601777 |
|---|
| End bp | 1602049 |
|---|
| Gene Length | 273 bp |
|---|
| Protein Length | 90 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641690931 |
|---|
| Product | microcompartments protein |
|---|
| Protein accession | YP_001818175 |
|---|
| Protein GI | 182413109 |
|---|
| COG category | [C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAT CCCTCGGCAT GATCGAAACC AAGGGCTACG TTGGCTCCAT CGAAGCCAGC
GACGCCATGG TCAAAGCGGC CGGCGTCTCG CTCGCCCGCC AGGTCCAGAT CGGTGGCGGC
CTCGTCACCA TCATCGTCAA AGGCGACGTC GGCAGCGTGA AAGCCGCCGT CGAAGCCGGC
GCCGATGCCG CCAAGCGCGT CGGTGAACTC GTCTGCGCCC ACGTCATCGC CCGCCCGCAC
GGCGAGCTGC TGAAACAATT CGGCTTGGCC TGA
|
|---|
| Protein sequence | MNESLGMIET KGYVGSIEAS DAMVKAAGVS LARQVQIGGG LVTIIVKGDV GSVKAAVEAG
ADAAKRVGEL VCAHVIARPH GELLKQFGLA
|
|---|
| |