| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1283 |
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| Symbol | |
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| ID | 6206801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1589018 |
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| End bp | 1591981 |
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| Gene Length | 2964 bp |
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| Protein Length | 987 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641690924 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001818168 |
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| Protein GI | 182413102 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.64034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCAA CGTGCCGCTG GCTGATTGGA CTCACGATGA TCGTGGCCGC CCTGGGTGCG
AAGGCTTCGA CCAAAACCGA ATGCATCTAC CTCTCGGGCC GGGATGCGGC GAGTGCGGTG
CCGTGGGAGT TTCGCGTGTC GGCTGGCGCG CGGGCGGGCG AGTGGGCGAC GCTGCCGGTG
CCGTCGAACT GGGAGCTGCA CGGGTTCGGA ACGCTGAGCT ATCACAGCAC GACGCCCAGC
GAGAGCGGTG AATACCGCCA TCGATTCGTC GTGCCGAAGG AATGGGCCGG AGCCCGGATC
AAGCTCGTGT TCGATGGCGT GATGACGGAC GCACGCGTCT CCGTGAACGG CCGGCCGGCG
AGACCCGTGC ACCAGGGTGG TTTTTATCGG TTCAGCTACG ACGTGACCAA TCTGGTCCGC
TGCGGTGAGG AGAACTTGTT GGAGGTTGCG GTGTACGAGA CGTCCTCGAA CGACGGGGTG
AATCGCGCCG AGCGGACCGG CGACTACTGG AACTTCGGTG GGATCTTTCG GCCGGTCTGG
CTCGAGGTGA GCCCACCGCA GGCGATCGAG CGGCTGGCGA TTGACGCGCG CGCGGACGGA
GCGTTCTCGG TGGACGTGTT CGTCGAGGGT GAAGGTTCGG CCGCGCAGGT GGAGGTTCAG
GTATTCGGCC GCGACGGCAG TCCGGTCGGA CCGGCTTGGC GGTCGCCGTT GCACCACCCA
GCAGAGTCGC AGCAGCCACG AACGTGGTCC GATCGGACCA CGTTCGTGGC TCGGCTCACC
GGCATGGTTG CGGCGCCCCT GACGTGGACG GCGGAGACAC CGCACCTGTA TGCGGCGGAA
GTCCGGCTGC TCGATGCGGC TGGCACCGAG TTGCACCGCC GCCGGGCGCG GTTTGGTTTT
CGCACGTTTG AGATTCGCCG CGGCGACGGG TTTTATCTCA ACGGCCAGCG GATCGTGCTG
CAGGGCGCGA ACCGGCACTC GTTCAACGCG AGCACGGGGC GCGCGCTGTC CGAGGTCGAT
CATCGGGAGG ACATCCGGTT GATGAAGGAG ATGAATGCGA CGGCCGTCCG AATGTCGCAT
TATCCGCCGG ACGAACGGTT CCTCGAGCTC TGCGACGAGC TCGGCCTGTA CGTACTCGAC
GAACTCGCGG GCTGGCAGAA GAGCTACGAC ACCGCGGTGG GACGGCAGCT GCTCGCGGCG
ATGGTCCAGC GCGATGTGAA TCATCCGAGC GTGCTGCTGT GGGACAACGG CAACGAAGGC
GGCTGGAACA CCGAACTCGA TGACGACTTC GCCAAGTGGG ACCCGCAACG GCGGCCGGTG
CTGCATCCGT GGCAAATCTT CAGCGGCGTG AACACGGCGC ACTATCGGCT CTACCCGCAA
TTGCCGGCAC TCGTCGCGGG ACTCGAGACG GCGTGGCGGT ACGATCCCAA CGATGCCGGC
AAACGCCGCG AACAACCGTT GATCTATTTG CCGACGGAGT TCCTCCACGG ACTCTACGAC
GGCGGCGCGG GCGCCGGCAT GGAGGATTAT TGGACGCTGA TGCGGAGCGG GAAGACGTTT
GGTGGCGGAT TCGTCTGGGC GTGGATGGAC GAAGGCGTGC GTCGGCCCGA CACCGGCGAG
ATCGACGTGC ACGGCAACCA GGCGCCGGAC GGGATTCTCG GGCCGCGACG CGAACGGGAG
GCGAGTTTCT ATACCTTGAA AGAGCTGTGG TCTCCGATCG CCGTCGTGGC GCCGCAAGGA
CGCGAGTTGT CCGATGACTT CGACGGGCGG CTGACGATCG AGAATCGTCA CAGCTTCACG
AACACGTCGG AGTGCCGGTT CGCGTGGGAA CTGCGGCGGT TGCCGGAGTC GCGGCAGGAC
GAATCGAAAG CGAAACCGCA GGCCACCGGA ATCGCCGCCG GTGTGGCGGT GGCGCCGCAG
ATCGCACCCG GCGCGAGGGG AGAGCTCCAA CTCGCGCTGC CGGAGAACTG GCGCGACGCC
GATGTGTTGG CGCTGCGCGT CGAGGATCCG AGCGGACGCG AGCTGTGGAC CACCACGTGG
GCGCTGCCGG GAGTCGAGCG GTTCGCGGGC ATTGCGATGG AGGGCGCTTC ACCTGATGCA
GCCAAAGCGA GAAACCAGAT CACGGGCGGG ACGCCCGTGC CACGTGGCAT GGGCGTCCCG
CCCATGTCAG CAATCGAGCA GCCGGGTGCG CTGGTCGTGA CGGCGAGTGA GCTCGTCGTG
CGATTCGATC GGATCACCGG CGCGCTGGCC GAAATTGGCC GGAGAGACAA AAAGCTGTCG
CTCGGCTCCG GGCTCCGCGC GCTGACGCAG TCATCGGTCT TGAGTTCACT GACCACGCGA
GCGGAGGGTG GCGACTACGT GATCAGCTGC CGTTACGGGA ATGGAGACGA GCGGGTCGCC
GCTCCAGCCG GGCTGCGTTC GGTCGAGTGG CGCGTGCGCG CCGACGGCTG GATCGACTGC
GCGTATCTCT ACGCAGGGAC GAAGGGCAGC ACGTTCCAAG GCGTGGGATT CGATCTGCCG
GGTGCCGAGA TTCGCGGCAA GAGCTGGGTA GGCGACGGGC CTTATCGCGT GTGGCAGAAT
CGGCGGCGTG GGGTGACGCT CGGTGCGTGG TCGACCGCTT ACAACGACAC CATCACCGGC
TGGCGAGGCT TCGAGTATCC CGAATTCAAG GGCTTCTTCT CGGGCGTGCG CTGGCTGACG
CTGGACACGA CGGCCGGTTC GCTGACAATC GTGCCACAGA CGCCGGGCCT GTTCGTGCAG
GTGATGCGCC CGGATCTGCC GCCGGTCGAG CTGCAGGCGA AAACGGCGCT GGCGCTGCCT
GATGCCGACC TCGGCGTGCT GCACGCGATT CCGGCGATTG GCACGAAATT CAGCCGGCCG
GAGGAGATGG GCCCGCAGGG GCAGACGCCC GAGGTGCAGC CGGAGTATCG GGGGGCGTTC
AGCTTGAAAT GGGAGTCGCC CTAG
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| Protein sequence | MLATCRWLIG LTMIVAALGA KASTKTECIY LSGRDAASAV PWEFRVSAGA RAGEWATLPV
PSNWELHGFG TLSYHSTTPS ESGEYRHRFV VPKEWAGARI KLVFDGVMTD ARVSVNGRPA
RPVHQGGFYR FSYDVTNLVR CGEENLLEVA VYETSSNDGV NRAERTGDYW NFGGIFRPVW
LEVSPPQAIE RLAIDARADG AFSVDVFVEG EGSAAQVEVQ VFGRDGSPVG PAWRSPLHHP
AESQQPRTWS DRTTFVARLT GMVAAPLTWT AETPHLYAAE VRLLDAAGTE LHRRRARFGF
RTFEIRRGDG FYLNGQRIVL QGANRHSFNA STGRALSEVD HREDIRLMKE MNATAVRMSH
YPPDERFLEL CDELGLYVLD ELAGWQKSYD TAVGRQLLAA MVQRDVNHPS VLLWDNGNEG
GWNTELDDDF AKWDPQRRPV LHPWQIFSGV NTAHYRLYPQ LPALVAGLET AWRYDPNDAG
KRREQPLIYL PTEFLHGLYD GGAGAGMEDY WTLMRSGKTF GGGFVWAWMD EGVRRPDTGE
IDVHGNQAPD GILGPRRERE ASFYTLKELW SPIAVVAPQG RELSDDFDGR LTIENRHSFT
NTSECRFAWE LRRLPESRQD ESKAKPQATG IAAGVAVAPQ IAPGARGELQ LALPENWRDA
DVLALRVEDP SGRELWTTTW ALPGVERFAG IAMEGASPDA AKARNQITGG TPVPRGMGVP
PMSAIEQPGA LVVTASELVV RFDRITGALA EIGRRDKKLS LGSGLRALTQ SSVLSSLTTR
AEGGDYVISC RYGNGDERVA APAGLRSVEW RVRADGWIDC AYLYAGTKGS TFQGVGFDLP
GAEIRGKSWV GDGPYRVWQN RRRGVTLGAW STAYNDTITG WRGFEYPEFK GFFSGVRWLT
LDTTAGSLTI VPQTPGLFVQ VMRPDLPPVE LQAKTALALP DADLGVLHAI PAIGTKFSRP
EEMGPQGQTP EVQPEYRGAF SLKWESP
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