| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1277 |
|---|
| Symbol | |
|---|
| ID | 6206094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 1583542 |
|---|
| End bp | 1584288 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641690918 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001818162 |
|---|
| Protein GI | 182413096 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.838322 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATGATC TTCTGGCCCG CGCACTCGGT GGGGATACCT CGCAGCTCGT CGCGGAGCAG
CGGCAGGCCT TGCTGTCCCG GCTGCTCTCG CGGCTGGCGC ACGAGGTGCG CAATCCGCTG
AGCTCGCTCG ATGTCCACGT GCAGCTGCTC GAGGAGGACC TGCATCAGCT CCCCGGCGGC
ACGTTGCCCA AGGCCGCGGA ACGCCTGGAG ATCATCCGGA CCGAACTGAA GCGGCTGGAC
AATATCGTCC TGCAATTTCT CAGCCTCGCC GGCCCGACGA CGGTGAATCG CCAGCCGGTG
CAGATCGGCG AAGTGATTGA CTACGTCTGC CGGCTCTTCG CGCCCGAGGC GGCGACGCGC
GACATCGAGC TCAGCGCCCA CGTCGACGCC GGGCTGCCGC CACTGGAAGC GGATCGCGCC
CAGCTCACGC AGGCGTTGGT CAACCTCGTG ATCAATGCGC TGCAGGCGGT GGAACGCCGC
GGCCGCGTGG AAGTGCTGGC GCGCCGCAAT GAGACGCCCG CGGCTCTCGT GGTGGAGGTG
CGCGACAGCG GCGCCGGCAT CGATCCCCAG CACGCCGTCG CGATGTTCGA GCCGTTTTAC
ACGACGCGCG ATCAGGGCAC GGGTCTCGGA CTGTGGATCG TGCACCAAAT CGTGTCGGCC
CACGGCGGCC GCGTGCAGGC GACGAATGCG CCGGCGGGCG GCGCGGTGTT CACGCTGCAA
CTGCCGGTGC CGGCGACAAC CTTATGA
|
|---|
| Protein sequence | MDDLLARALG GDTSQLVAEQ RQALLSRLLS RLAHEVRNPL SSLDVHVQLL EEDLHQLPGG
TLPKAAERLE IIRTELKRLD NIVLQFLSLA GPTTVNRQPV QIGEVIDYVC RLFAPEAATR
DIELSAHVDA GLPPLEADRA QLTQALVNLV INALQAVERR GRVEVLARRN ETPAALVVEV
RDSGAGIDPQ HAVAMFEPFY TTRDQGTGLG LWIVHQIVSA HGGRVQATNA PAGGAVFTLQ
LPVPATTL
|
|---|
| |