Gene Oter_1275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1275 
Symbol 
ID6206184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1580703 
End bp1582385 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content69% 
IMG OID641690916 
Productformate--tetrahydrofolate ligase 
Protein accessionYP_001818160 
Protein GI182413094 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2759] Formyltetrahydrofolate synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCG CCGGCCTCAC CGCCCTAGAG ATCTCCCGCC GCGCGCAGCT TCGACCGATC 
GCCGAAGTCG CCGCCCAGCT CGGCATCGCC GCCGACGACC TGGATCTCTA CGGCCGTTAC
CGCGCGAAGC TCTCGCTCGG ACTCACGCGG CGCTTGCAGG ACGCGCCGCC AGGAAAGCTC
GTGCTGATGA CGGCGATCAC GCCGACCCCC GCCGGCGAGG GTAAGACGAC CACGAGCATC
GGCCTCGTCG ACGCGCTGAA CCGGATCGGC CGGAAGGCCG TGGTGTGCCT GCGCGAACCG
GCGATCGGCC CGTGCTTCGG CATGAAAGGC GGCGGCGCCG GTGGCGGGCG CGCACAGGTC
GTGCCGATGG AGGACATCAA CCTCCATTTC AACGGCGACT TCCACGCGGT GACCTCCGCG
CACAACCTGC TCGCGGCGAT GCTCGACAGC CACCTGCACT TCGGCAACGC GCTCGGCATC
GATGTGCGGC GCGTGCTCTG GCGGCGCGTG ATGGACATGA ACGACCGCGC CCTGCGCGAA
CTCGTGATCG GACTCGGCGG TGCGGGCAAC TCGATGCCGC GCGAGTCGGG CTTCGACATC
ACGGCTGCGT CCGAGGTGAT GGCGACGCTC TGTTTTGCTG AGTCGCTGCC GGACCTGAAG
GAGCGGTTCG GTCGGATCGC GGTGGCGTGG AACGCGGCCC GCCGGCTGGT CACCGCGAAC
GACCTGAAAG CGGCGGGCGC CATGACCGTG CTGATGCGCT ACGCGATCCA GCCGAACCTG
GTGCAGACGC TGGAGGGCAG CCCCGCACTC ATTCACGGCG GACCTTTCGG CAACATCGCG
CACGGCTGCA ACTCCGTCAC CGCGACGAAA CTCGGACTCC GGCTGGCCGA GTTCGCCGTG
ACGGAGGCGG GCTTCGGCGC CGATCTCGGC GCGGAGAAGT TTCTCAACAT CAAATGTCGC
AAGACCGGTC TGCGGCCCGA TGTGGCGGTG TTGGTGGCGA CGATCCGCGC GCTGAAATAT
CACGGGGGAG TCAAGGTGGC GGATCTCGGC CGGCCGGACG TGGCCGCGCT GACCGCGGGA
CTCGACAATC TGCGCAAGCA CCTTGAGAAC CTGCGCGCGT TCGGGCTGCC GGTGGTGGTG
GCGGTGAACA CGTTTCCGAG TGACACGCTC GAGGAATGGC AGGTCGTGGC GGCGGCGTGC
GCAGAGCTGG GCGCTCCCGT GGCGCGCTGC GAGCATTTCA CCCGGGGCGG CGAGGGCGCC
GAAGATCTCG CCCGGCTGGT GGCGCAGACG GCCGCGACGC CGAGCCGGCC GATCGCGTTC
ACCTATGCCG ACGACCTGCC GCTGCTCGAG AAGGTGCGGA GCGTTGCGCG GGCGATCTAC
GGCGCAGATG ACGTGGTGCC AGAAGGTGCG ACGGCGGAAA AGCTGCGCGG CTTCGAGGCG
GCGGGTTTCG GCGCGCTGCC GGTGTGCATG GCGAAGACGC AGTATTCGTT TTCGGCGAAT
CCGCAGCTGC GCAACCGGCC GCGCGGGTTC AAGGTGCCGC TGCGCGACGC GCGGCTGAAC
GCCGGCCCCG GTTTCGTCGT GATCTACACT GGCGAAATCA TGACGATGCC CGGTTTGCCC
AAGGTCCCCG CCGCCGAGGC GATGGACATC GACGCGGACG GCAACACGGT GGGGTTGTTC
TAG
 
Protein sequence
MNPAGLTALE ISRRAQLRPI AEVAAQLGIA ADDLDLYGRY RAKLSLGLTR RLQDAPPGKL 
VLMTAITPTP AGEGKTTTSI GLVDALNRIG RKAVVCLREP AIGPCFGMKG GGAGGGRAQV
VPMEDINLHF NGDFHAVTSA HNLLAAMLDS HLHFGNALGI DVRRVLWRRV MDMNDRALRE
LVIGLGGAGN SMPRESGFDI TAASEVMATL CFAESLPDLK ERFGRIAVAW NAARRLVTAN
DLKAAGAMTV LMRYAIQPNL VQTLEGSPAL IHGGPFGNIA HGCNSVTATK LGLRLAEFAV
TEAGFGADLG AEKFLNIKCR KTGLRPDVAV LVATIRALKY HGGVKVADLG RPDVAALTAG
LDNLRKHLEN LRAFGLPVVV AVNTFPSDTL EEWQVVAAAC AELGAPVARC EHFTRGGEGA
EDLARLVAQT AATPSRPIAF TYADDLPLLE KVRSVARAIY GADDVVPEGA TAEKLRGFEA
AGFGALPVCM AKTQYSFSAN PQLRNRPRGF KVPLRDARLN AGPGFVVIYT GEIMTMPGLP
KVPAAEAMDI DADGNTVGLF