| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1255 |
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| Symbol | |
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| ID | 6205731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1549416 |
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| End bp | 1550756 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641690896 |
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| Product | hypothetical protein |
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| Protein accession | YP_001818140 |
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| Protein GI | 182413074 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.329867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACAC CCGAAAAGAA ACGGCTGCGG ATCGTCACCA CGCTGGTGGA GACGTTCGGG
CTGAGCCCGG CCGTGGCTTC GGTGGTCGCC TTGGGCTTGT TCGCCATCTG TGCTGCCGCG
GTCGTGTGGG TAATTCAGTC CGCGCCACCG GGGACTCTCG TACTGACCAG CGGGCCGGCG
GGCAGCTCGT TTCATCGCTG GGCGACCGCT TATCAAAAGG CGCTGGCGGG GGACGTAACG
TTGGAGATCC GCGTGTCCAG CGGGTCGATG GACAACCTCC AGCGGCTGCA AGCGGCGGAC
TCGGGCGTCG ACATCGGGTT CGTGCAGGGT GGAATGGCCA AGGAGGAAAA TCTCAGCGGG
CTGATGTCGC TCGGGACGAT CGCGTACCAG CCGTTGTGGA TCTTCTATCG CCGCGCGACT
GCGATCACGC GACTCGCCGA GCTCGAGGGC CAGCGGATCG CGGTCGGGCC GGCGGGGAGC
GGCACGCGGG CGCTCGCGTT GCGGTTGCTG CAGGCCAACG GCATCACCGG TGCGCCGACG
ACGTTCGTCG ATCTCGATGC CGAAACCGCG GCGCCGGCGT TGCTGGAAGG CCGGCTCGAC
GCGGTGTTTC TCATGGGTGA CTCCGCGCCG ATGCAGACAC TGCGCAGCCT GATGCGCGCG
CCGAACGTGC AGCTGTTCGA TTTCAAACAG GCGGACGCGT ACGTTCGCCG CCACGCGTTC
TTGAACAAAT TCGAGCTGCC CCAAGGGACG CTCGATTTGG GCAAGAACGT GCCGGATCAC
GACGTGACGC TCGTCGGGCC CACGGTCGAG TTGGTGGCGC GCGAAGGGCT GAACTCCGCG
TTGTCGGACC TGTTGCTCAA GGCCGCCAAG GAAGTGCACG GGCGTTCGGG ATTCTTGCAG
AAGCGCGGGG AGTTTCCTGC GCCGAGCGAG CACGAAATCC CGCTGAGCGA GGACGCGCAG
CGCTACTACA AGTCGGGTGA AGGTTTCATT TATCGCACGG TGCCGTCGTT CTGGTTGGCG
AGCCTGATCA CCCGGACGCT CGTGGCGATC GTGCCGCTCG CGCTGATCCT GATTCCTGCG
ATCCGGCTGC TTCCGGTCGG CTATCGGATG AGCGTTCAGC TCCGGCTTTA CCGGTATTAC
CGGCCGCTGC TCCGCATCGA GCGCGAGACG TTCGCGCCGT TGAGCCCCGA GCGGCGAAAC
GAACTGCTTA CGCGACTCGA CGAAATCGAG CAGAGCATCA ACCGGCTCAA GGTGCCGGCG
TCCTTTGCGG ATCGGTTCTA CTGGCTGCGC GGCTATCTCG CGTTCGTGCG CCAGCGGCTG
CAGACGCCGA GCAACGATTA A
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| Protein sequence | MDTPEKKRLR IVTTLVETFG LSPAVASVVA LGLFAICAAA VVWVIQSAPP GTLVLTSGPA
GSSFHRWATA YQKALAGDVT LEIRVSSGSM DNLQRLQAAD SGVDIGFVQG GMAKEENLSG
LMSLGTIAYQ PLWIFYRRAT AITRLAELEG QRIAVGPAGS GTRALALRLL QANGITGAPT
TFVDLDAETA APALLEGRLD AVFLMGDSAP MQTLRSLMRA PNVQLFDFKQ ADAYVRRHAF
LNKFELPQGT LDLGKNVPDH DVTLVGPTVE LVAREGLNSA LSDLLLKAAK EVHGRSGFLQ
KRGEFPAPSE HEIPLSEDAQ RYYKSGEGFI YRTVPSFWLA SLITRTLVAI VPLALILIPA
IRLLPVGYRM SVQLRLYRYY RPLLRIERET FAPLSPERRN ELLTRLDEIE QSINRLKVPA
SFADRFYWLR GYLAFVRQRL QTPSND
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