Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1238 |
Symbol | |
ID | 6206623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1532265 |
End bp | 1533398 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641690879 |
Product | histidine kinase |
Protein accession | YP_001818123 |
Protein GI | 182413057 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0477765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACTC AAAAGACACG GAAACTTTCA CGCTACCTGG CGGCGCTGCG CAGCCATCTG CGGCGCCGTC ATGCGCGCAG GGGAAGGCCG ACGCCTGGGA TTGGCCGCGA GTTCGCGAGC GCGGGCTTGA AGGCGCTCGA CTTGGCCAGA ATGCACGAAG CGTCGCTGAT GGCGCTGGCG GCGACGCATG ATTTCGGCGA CAGCCGCAAC GGCTTGATGA AGCGGGCCGG GAATTTCTTT GCCGACGCGC TGCTCCCGAT CATGGACCAG CATCGCGGTA CCGGGGCTTC CTTCCAGCGC CTGCAGCAGC GCGCCGAGAC CCTGCGCCTG CACGCGGCCG CGCTCGCCGA AGGCAATCGC CAGCTGAACC GCGAAGTGAA GCGCCGCAAA GCCGGGGAGG CCGCGGTTGA AAAGGCCAAG GAGCACTACC GTTGCCTCTT CCTGGAATCG GAGGTCATGC AGAAGAAGCT CCAGCGCCTG ACTCGCCAGA TACTATCCGC GCAGGAAGAC GAACGCCGCG AGATCAGTCG GGAGCTGCAT GGCGAGGTGG TCCAGACGCT GGTGGGGATA AACGTTCAGC TGGCGACCCT GGGCAAGGCG GCTTCGCTCG GCATCCGGGG CTTGAAGGCG AAGATCGATC TGACGCAACG GCTGGTGGCA AGATCCGTCA ACGCCGTGCA CCAGTTCGCG CGCGAGTTGC GCCCCGCCGT ACTCGATGAT CTCGGGCTCA TTCCGGCGCT GCACGCGTCC ATGAAGACCA TGGCCGCACG GAGGAATCTG AAGGTCCGGC TGACGGCGTC GGCGGCGGTG GAGGCGCTGG ACGCGCCGCT GCGCACGGTG CTGTACCGCG TGGCGCAGGA GGCGCTCACC AATGTCACGC GGCACGCGCG GGCCCGCCAT GTCGACCTGA CCATCGTCGA GGTGGCCGGT GGCATCCGCC TGGACGTGCA CGACGACGGA AAAGGCTTCG CGGTGCAGAA GACTCTGTCG TCCCGTGCGA ACCGGCGGCT GGGGTTGCTG GGCATGAGAG AGCGGGTGGA AATGGTAGGC GGAACGCTCA CGATCGAATC CTCCCCCGGC CGCGGTACGA CCGTGCGCGC GGAGGTGCCG TTCAACCCGA AGGAGGGCGC ATGA
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Protein sequence | MNTQKTRKLS RYLAALRSHL RRRHARRGRP TPGIGREFAS AGLKALDLAR MHEASLMALA ATHDFGDSRN GLMKRAGNFF ADALLPIMDQ HRGTGASFQR LQQRAETLRL HAAALAEGNR QLNREVKRRK AGEAAVEKAK EHYRCLFLES EVMQKKLQRL TRQILSAQED ERREISRELH GEVVQTLVGI NVQLATLGKA ASLGIRGLKA KIDLTQRLVA RSVNAVHQFA RELRPAVLDD LGLIPALHAS MKTMAARRNL KVRLTASAAV EALDAPLRTV LYRVAQEALT NVTRHARARH VDLTIVEVAG GIRLDVHDDG KGFAVQKTLS SRANRRLGLL GMRERVEMVG GTLTIESSPG RGTTVRAEVP FNPKEGA
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