| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1216 |
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| Symbol | |
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| ID | 6206316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1512260 |
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| End bp | 1513252 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641690858 |
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| Product | integrase family protein |
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| Protein accession | YP_001818102 |
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| Protein GI | 182413036 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGT GTTGTTTTCG CAGCGCGCTC GCGTTCCGGC TTCAGTCCTT CTGGGAGACG
CGGGCCGCAT CGGGCCGCGG TCCTGTTCTC CTCAAGGTGC TGCGTTACCT CGACCGGTTT
CTTATCGGTG AGCTGCAGCC CGGCGATACA ATCACGCGTG AGGTCACCGA GCGTTATTTC
AAGAGCACCG AGCACTTGGC TCCGGGAACC CGGATCAACC GGATGTCGAT CCTCCGTCAG
TTCTGCCTCT ATCAAAGCCA TTTCGATCCT CGCACGTGCA TCGTGCACCG GATGTTTTTG
CCGCGGCGCA ATCGGCCGAT GCCGCACATC TACACGGTGG CCGAGGTCCG CCGGATCATG
GCGGCGGCAC CGCCGGCCGA ACGTTCTCCG GACCCGCTGC GTCCCGTGGT GTTCGCAACC
CTCGTCGGGT TCCTCTACGC CACCGGCCTG CGCGTTGGCG AGGCGGTGAA GCTCAATCTC
GCTGACGTCG ATCTGTCACG CCGTCTTCTG CTCATTCGCC AAACCAAGTT CGGCAAGACT
CGCTACGTGC CGCTGGCACC GTGCACCACC AAGCAGCTCG CGGCCTACGT GGCCCAGCGC
CGCGCGGCCA GATTCTCGCA GGAGCCGACC GCGCCATTTT TCCCGTCATC CCTCGGTGGA
CGCTATCACG TGCCGAGCTT CACGACGGTG TTTCTTCAAG TGTTGCGTCG GTTGGGGCTG
CGCGGCCCGC CCGGCCAGCG CGGGCCGCGC ATCCACGACT TGCGGCATTC CTTTGCGGTG
TCGCGGCTGA TGGCGTGGCA CAAGAGCGGC GATAATCTCT TCGCGAAGCT GCCCCTCCTG
TCCACTTACC TCGGGCACAG CACGGTGACC GGGACCGAGA TCTATCTGCA CGCCACCGCC
GAGCTGATGG AGTCGGTGGG CCAGCGTTTT CATGAGCACT TCGCGGTGCC ATCGGCCCGT
CTCTTATGTC AGCCCCCGAC CTTCCATCTC TGA
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| Protein sequence | MATCCFRSAL AFRLQSFWET RAASGRGPVL LKVLRYLDRF LIGELQPGDT ITREVTERYF
KSTEHLAPGT RINRMSILRQ FCLYQSHFDP RTCIVHRMFL PRRNRPMPHI YTVAEVRRIM
AAAPPAERSP DPLRPVVFAT LVGFLYATGL RVGEAVKLNL ADVDLSRRLL LIRQTKFGKT
RYVPLAPCTT KQLAAYVAQR RAARFSQEPT APFFPSSLGG RYHVPSFTTV FLQVLRRLGL
RGPPGQRGPR IHDLRHSFAV SRLMAWHKSG DNLFAKLPLL STYLGHSTVT GTEIYLHATA
ELMESVGQRF HEHFAVPSAR LLCQPPTFHL
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