Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1215 |
Symbol | |
ID | 6205277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1510958 |
End bp | 1512256 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641690857 |
Product | integrase family protein |
Protein accession | YP_001818101 |
Protein GI | 182413035 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGC CCTACTATTC TTTGGATCGC TCGACGGATG GCGGCCTGGA GCACTTTTAC TGCGAGCGAC GGACGCTGGC TGACTTTCGG CGTGGCGCGC TGGGCGATTA CTTCGACGGT TTGGCTCTGA CGCTGAAGAA GAACGGGTAT TCGATCCACC ACGGCTGCGG CATTCTCGGC ACTTGCTGCA TGTTCAACGT CTACGTGACG GAGCGTGGCA TCACCAAGGC CTCGGCTATT TCCGCCGAGT TGGTCGAGCC TTTCTTGGAC GACTATCTCC GCGGGGTCCG CACCACCAGC GCCCGCTATT CGCCGCGCGA CAACGCGCGA GCGCACTTGC GCCATCTGTT TTTCTATCTG GAGGCGCTCA AGGTTATCAC TCCGCCCAAG CCGGTGCAGG TCGTGACGCC CTACAGTTGG ATCCTCGATC CTTATATCGT CCATCTACGC GACGAGCGCG CCGTGGCGCC AGTGACGGTG AAGCGCCACC TCGCGCACAC CACCGCGTTC CTCGAGTTCC TGAAGCACGA CGTGCAACGG CCGCGCCTCA AGACCATCAG CGCCGAGCAG GTGGAGGCGC AGCTCAAGCG GCACATGAAG GACAGCAAAG ACAACGTGCG CTCGTTGTCA TCGAGCCTTC GCTCTTTCCT CCGCTACTGC GCGGATCACG GCCACACTCA GGCGGACTTC TCCGAGTTGG TCCCGCGACA GCGGCACTAT CGGCACGCTT CGCTCCCCAG GGGCATCGAG GATTCGGCGC TCGAACGCGT GCTGGCTGCG ATCGACAAGA CGAAGCCTAA TGGCGCACGC GACTACGCGA TCATTCTGTT GCTGATGGCG TATGGCATCC GTGCGATCTC CGCTGCAAAA CTCGTGATGG AGGATCTCGA CTGGCGGCAG GCCAAGATCC GCTTTCGCGC GCAAAAAGGC GGCAAGGAAG TGATCGTTCC GCTCCTCGAT GCGGTCGGGG ACGCGATCAT CGAGTGGCTC CGTCACCGCG ACCCGCGCAC GCCTCATCGC GAGGTGTTCC TCAGCACCAA GGCGCCGCAC GGATCGCTGA GCAGCATGGC GATCTCCACC GTGGTGAAGC ACTACCTGCA CAAGGCCGGC GTTCATCAGC CCGGACGCGG CGCGCACTCG TTACGGCATT CGTGGGCGAT CCGCGCGTTG GAGCACGATC AACCGATCAA GGCCATCGCC GATGCCCTGG GGCATCGTTA CATCGACACC ACCTACATCT ACGCCAAGGC TGACTTGAAG ACACTGCGGC AGGTGGCGAT GCCGTGGCCG GCGAGGTGA
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Protein sequence | MRKPYYSLDR STDGGLEHFY CERRTLADFR RGALGDYFDG LALTLKKNGY SIHHGCGILG TCCMFNVYVT ERGITKASAI SAELVEPFLD DYLRGVRTTS ARYSPRDNAR AHLRHLFFYL EALKVITPPK PVQVVTPYSW ILDPYIVHLR DERAVAPVTV KRHLAHTTAF LEFLKHDVQR PRLKTISAEQ VEAQLKRHMK DSKDNVRSLS SSLRSFLRYC ADHGHTQADF SELVPRQRHY RHASLPRGIE DSALERVLAA IDKTKPNGAR DYAIILLLMA YGIRAISAAK LVMEDLDWRQ AKIRFRAQKG GKEVIVPLLD AVGDAIIEWL RHRDPRTPHR EVFLSTKAPH GSLSSMAIST VVKHYLHKAG VHQPGRGAHS LRHSWAIRAL EHDQPIKAIA DALGHRYIDT TYIYAKADLK TLRQVAMPWP AR
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