| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1210 |
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| Symbol | |
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| ID | 6205007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1505498 |
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| End bp | 1506217 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641690852 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001818096 |
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| Protein GI | 182413030 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.27359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCTA CTACTTCGCT CCGCATCGTC GTCCTCAAAT GGGACCGGCT CTACGGCGAT
CTCATCCGGC GCCAGATTTG GGACGTCTGG CCCAACGCGG TGGTGCAGGT GTTTCAGCGC
GGGCTGGCGG CGCTGGATGC CATCCAGGAG GCGACGCCAA ATCTGTTCAT CGCCGGCGTC
AAGATCGAGG ACATGGACGG ATTGGAGCAT CTGGAGCCGT TCACCCAAAC CGAACTGCCA
ATCCTGATCG TCACCTCCCG GGCCGATGCC CGCACCTTCA AGATGCTCCG TCACGTCCGT
TACGACGGAA TCTACGATGG GTCCTCGGAA GGACTGGAGC ATCTCGCCCC AGCGCTGCGC
CAGGCCATGC AGCACCGGCT TTACGTCAGC CCGGCTCTGC TCCCTTTTCT GCAGGAGCGT
AGGAGCACCA CGTTGGACGC GCTGACTGAA CGGGAGCAGA TCGTGCTCTC GGTCATCGGC
GACGGTTCCG ACAACGCCCA AGCCAGCGAA CGGCTCGGCA TTTCCGCGAA AACCGTGGGG
ACGCATCGCG AGGCAATCAT GCGCAAGCTC GGGTTGCATC AGATCGGGCA GCTCATGCTG
TATGCGCTGC AAAATGGCTA CGTGCTGGTG ACCGCGAAGG GTGTTTTCTA CCCGGGGTTT
CAGCGTCGCT TTTGCCACGG CAAGGACAGT TCCGCCCTCA CCGGGTCGCG CCTGTCCTAG
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| Protein sequence | MSPTTSLRIV VLKWDRLYGD LIRRQIWDVW PNAVVQVFQR GLAALDAIQE ATPNLFIAGV
KIEDMDGLEH LEPFTQTELP ILIVTSRADA RTFKMLRHVR YDGIYDGSSE GLEHLAPALR
QAMQHRLYVS PALLPFLQER RSTTLDALTE REQIVLSVIG DGSDNAQASE RLGISAKTVG
THREAIMRKL GLHQIGQLML YALQNGYVLV TAKGVFYPGF QRRFCHGKDS SALTGSRLS
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