| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1186 |
|---|
| Symbol | |
|---|
| ID | 6207489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1475557 |
|---|
| End bp | 1479126 |
|---|
| Gene Length | 3570 bp |
|---|
| Protein Length | 1189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641690828 |
|---|
| Product | helicase domain-containing protein |
|---|
| Protein accession | YP_001818072 |
|---|
| Protein GI | 182413006 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATCC GTTACGCCGA CGAAAAACGC CTGCTGGATT ATCTCGTCCA GCGGCTGGAA
GACCGTCTGG CCGGCCGACA CGAAACGGAA ATCCTCCGCA CCCAGCCAAG TGATCATTGC
CAGCTCGGCG TCCTGGCGCC CTGGACTGCG GAGGCCGATC TTGAAGAGCA ACCGGAGGAG
GTGGTCGTCC CCGAAGCGCG CGCCGATCTG CCGGACGTCG CTCGCCCGGC GCCTCGCGCC
GCGCGTCCGG CCCGCGGAGC CCCCGCGCCG GCTGCCGTGG AAGGTGAGGC CGAACCGGAA
CCGCCGGTTG AGCCTTTCGC GCTCCGGGAA GATGCCGCCC GCCGACCGCC TTCCGCCCTT
GGACTTGCGG TCGCCGTCGC TTCCGACGCG GGCGAGGTCG TGCTGCGGGT AGCCGCGCGA
TGCACGGTGT ACTCCCGACA TTTCCCCGAC TACGCCAGCC AACGCTTGGA ACTCGGCAAC
CGTCCCACGG ATGTCGCGAC TCCCGGCGAG CGCGCATCGG TGTCCTTAGT CGAAAAGCTG
CACCGTCATG TGCTCGACCT TCCCGCCGTC ACCTTCCGCC TCGCGGCGGG CGTTGCCACC
ACCGCGGTCG ACGACGGGCA AGTCCAAGGG GTTTTCACGC AGCTAGTCAG CCAACTGCGG
GATGACCCCA GCACCTTGCG AAAATTTGAA GGGAATCGCG TCGTGCCGGT CGGCGCCCTG
CAGAACGAGG CAGCGTTCCA GCGTTTCTTG CAGGCTTGGC GCGGCCCGGC CGAGGTGCCC
AACCTTCGCG TCAGCGTGCG GGTGCGGGCG CAGCCGATCG CGGGCGGGCT ACGGATTGAG
GTCCATCTTT GCAACAACTC GCGCCGCGAC CTCGATCGAC CCTCAAACGA TCAATTCAGC
TCACTCTACG ACACCGAGGT CGGGGTGACC GTCGTTTCGG GCTCGCTCAT TCCCATCGAA
CTTCTGCCCG TACCCGACGA CTATCAATAC GACCGCAATG TGTACGCGCT CGGGCGCAAC
GCCGGTACGG AGGTTTCCGC TGACCGCCGA TCGATCCGTA CTCGGGCGCT CGCCCGCTAC
GAGCAGCCAC GAACGCGCAC ACAGGAGCGC GTGGTCGCAC GCTACCGCGA CTTGGCCGAT
AACCCGTTTC CAGTCCTGGA AGCGATTCAC GGTGCGATGC ACGACTACGC ACGCGATTGG
ACGGACCGGA TCATCGGCAA CAATGCGCTC GGCCTGCCGC CCGATGCTCT TGCCGCCTGC
GACAACGACC TCGCCGCATT CCGTGCCGAG ATCGGCGATT TTAGTGCCGG TATCGCCGCG
CTCCACGCAG ATGAGCGGCT TCTCACCGCA TTCCAGGCCA TGAATCGGGC TTTCGCCGAT
AGCGGCTATC CCGCGTGGCG ACTTTTCCAG ATCGTCTTCA TCGTTTCACA GCTTCCCTCG
CTCTTGGTTC GCGAAGGCCG GACCTCGGCA GAATGGCCCG CCGGTACCGT TCACGACTGG
TCGGACATCC TTGATCGGGC CGACGTGCTG TGGTTTCCCA CTGGCGGCGG CAAGACGGAG
GCGTATCTCG GCCTTGTCGG CTGCGCCGCC CTGTACGACC GGCTTCGGGG TAAGCACTTC
GGCGTAACGG CGTGGCTACG TTTTCCGCTG CGCATGTTAA GCGTGCAGCA ATTGCAGCGG
GCGATGCGCA CGGTCTGGCT CATCGAACTC CAGCGGCGAG ACCTTGAGCG CACGCGCGGT
CGCTTGGGCG ACCGATTTTC GCTCGGCTAT TTTGTCGGCT CGAGCAATAC GCCCAACCGC
CTTGGCTCAT GGATCTTTGA CCGGCTGGAG TCCGACGAAA GACAGCGCGA GCGCCTCCTC
CTGATTCCGG ACTGTCCGGC CTGCCGGCGC GAGGGTGAAG TTGCCATCCA AGTCGATCGA
ACCAACGAGC GCATTCGGCA CGTCTGCGGC CATTGTCACG TCGAATTGCC GGTCTATATT
AGTGACGACG AAATCTACCG GTTTCAGCCC ACGTTGCTGG TCGGCACGAT TGATAAGGTG
GCGGCGATCG CCTACCGCGC GGAAGTCGCG ACTCTGTGGC TCGGCCCGCA GTGGCGCTGT
GCCAACCCGG AACATGGATT TGGCAACGGC GAATGGTGCA CGGTCTTCGG TTGTAATTCG
AACAACACCA GGGCCACTCC CCGCGCCCAC CGGGTGCCGG TAGTTCCGCA CGATCCAGCG
CCGGCACTGC ATATTCAGGA CGAACTCCAC CTGCTGCAGG AAGAGTTGGG CGCATTTGCC
GGCCATTACG AGACCATGGT TCGGGCCAAT GAACGCGCGT CAACCGGCCA GCCGGCCAAA
ATCATCGCCG CGACCGCCAC CATCGCCGGC TACGTGCACC AAGCGCGTCA AATCTATGGG
GTCCGGGCCG TCCGGCGCTT TCCCAACCGG GGCTATTCGC TCGACCAGAA TTTCTACGCG
ACCGTGGAAC GCGAATCGAG CGCCGCCGAC GCTCCGGCCA AGACGGCGCG CATCTTCACG
GCCTTCCGTC CGCCCTTCCT TCGTCCGGCG GATGCCGTCG CACGCTGTGC AGAGATTCTA
CACGAAGCGA TTAATGAACT GCAATCCGAC CCGGTGGCGC ACGGTCGCCG GCTCGTCTTG
GAGGCGACTA GCGAAGCCGA AATCCGAGAA CTGTTGGCCT TCTATTCCCG CACGCTCACG
TATGTCGGCA AGCGCGACAG CGGGGTACGA ATTACCCAAC GGTTCGAGCA GGACAGTGCG
AAAGCCGGCA GCGGGTTGCG CCCGGGCGGC GTGCGTGACC TCAACGTCAA ATATCTCTCC
GGCCATTCCA CGCTGAAGGA AATCTCGACG ACTGTGAAGC GGGCCGAATC GCAAACTCCG
TGGGCGGCGG CGGATCATTT GGATGCGACT GTCGCTACGG ACGTCATCAG CCACGGCGTC
GACGTCGAGT ACTATAACCT GATGTTCCTG GAGCGCATTC CGGAACAGGT AGCCAACTAT
ATTCAAGTGT CGAGTCGCTC GGGGCGCCAG CACGTCGGGC TGGTTCTAGC GATTCTCCCG
CGCTACTCGT TACGCGCGAG CTCCATCTAT GACAGATTCC CCCAGTTCCA TCGCCACCTC
GACCGCATGG TCTTGCCCGT GCCGGTCAAT CGTTTCGCAC GCGCCGCCGT GAACCGCAGT
TTTCCCGGCG TCCTGCTGGG CTCCCTTTAT GGGCGATACC TCAACGCGCT CCACGGAAGC
AAACCCGAGC GCCTCCGGTG GGTGAGCCGC GGCATGTCAG CCGGAGCGGC CCCGCTGTCG
CGCGATGCCC TGCGCGAGGC GCTCTTCGCC AGTTACGCCT TGGGCGACTC CCGCTACGAC
CTCTCGCTCG AAGCCCAAAT GACCGAAGCG CTGGAACGTG ACTGGCAGCG GTTCTTGTTG
GAAATCCTCA CGCCCAACCA CCAGGACCTC ACCGAACTCT TCGAGCCCAA ACCGATGAGC
AGCTTGCGGG ATGTCGATGT GCCGGTGCCG TTCCGGCCGG ACGATGCCGC CATGGATTAT
CGCGAGTTAC GTTGGTTCGG GCAGCGCTAG
|
|---|
| Protein sequence | MPIRYADEKR LLDYLVQRLE DRLAGRHETE ILRTQPSDHC QLGVLAPWTA EADLEEQPEE
VVVPEARADL PDVARPAPRA ARPARGAPAP AAVEGEAEPE PPVEPFALRE DAARRPPSAL
GLAVAVASDA GEVVLRVAAR CTVYSRHFPD YASQRLELGN RPTDVATPGE RASVSLVEKL
HRHVLDLPAV TFRLAAGVAT TAVDDGQVQG VFTQLVSQLR DDPSTLRKFE GNRVVPVGAL
QNEAAFQRFL QAWRGPAEVP NLRVSVRVRA QPIAGGLRIE VHLCNNSRRD LDRPSNDQFS
SLYDTEVGVT VVSGSLIPIE LLPVPDDYQY DRNVYALGRN AGTEVSADRR SIRTRALARY
EQPRTRTQER VVARYRDLAD NPFPVLEAIH GAMHDYARDW TDRIIGNNAL GLPPDALAAC
DNDLAAFRAE IGDFSAGIAA LHADERLLTA FQAMNRAFAD SGYPAWRLFQ IVFIVSQLPS
LLVREGRTSA EWPAGTVHDW SDILDRADVL WFPTGGGKTE AYLGLVGCAA LYDRLRGKHF
GVTAWLRFPL RMLSVQQLQR AMRTVWLIEL QRRDLERTRG RLGDRFSLGY FVGSSNTPNR
LGSWIFDRLE SDERQRERLL LIPDCPACRR EGEVAIQVDR TNERIRHVCG HCHVELPVYI
SDDEIYRFQP TLLVGTIDKV AAIAYRAEVA TLWLGPQWRC ANPEHGFGNG EWCTVFGCNS
NNTRATPRAH RVPVVPHDPA PALHIQDELH LLQEELGAFA GHYETMVRAN ERASTGQPAK
IIAATATIAG YVHQARQIYG VRAVRRFPNR GYSLDQNFYA TVERESSAAD APAKTARIFT
AFRPPFLRPA DAVARCAEIL HEAINELQSD PVAHGRRLVL EATSEAEIRE LLAFYSRTLT
YVGKRDSGVR ITQRFEQDSA KAGSGLRPGG VRDLNVKYLS GHSTLKEIST TVKRAESQTP
WAAADHLDAT VATDVISHGV DVEYYNLMFL ERIPEQVANY IQVSSRSGRQ HVGLVLAILP
RYSLRASSIY DRFPQFHRHL DRMVLPVPVN RFARAAVNRS FPGVLLGSLY GRYLNALHGS
KPERLRWVSR GMSAGAAPLS RDALREALFA SYALGDSRYD LSLEAQMTEA LERDWQRFLL
EILTPNHQDL TELFEPKPMS SLRDVDVPVP FRPDDAAMDY RELRWFGQR
|
|---|
| |