| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1185 |
|---|
| Symbol | |
|---|
| ID | 6204961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1473692 |
|---|
| End bp | 1475554 |
|---|
| Gene Length | 1863 bp |
|---|
| Protein Length | 620 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641690827 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001818071 |
|---|
| Protein GI | 182413005 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.76534 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTCA ACCGGGGCAA AGTTCAGATT CTCTACGGAT ATCTGCCGGG CGCGGTCTTT
GCGCACGATG AATACGGCCA TTGCCGCGTG ACCATGATCG AACTCAGCGC CTTGGGCCAA
ATCAACCGGG CGGCGTTGGC CGAGGTCGTA GGCGACATGC TCAACCAGTG GCCGAACGAC
TGGCAGCGAC AAGCGTTTCC CGCCGTGCGC AATGCGGACG ATCTCGCGCG TAACTATTTC
GTCGGTGAGC CGACCGGCGT AAAGTTCGAG CCGTTTCCAA CGGCGTTGCG CTGTCCGCGC
TGCGGACGGG TCTACCGCCT CCGGGACCTG CAGCGTTCGA CCGCGACTCC CGGTCAGTGC
CCCCTGGTGG GCTGCGGCGG GAAACTGGAA CAGATGCCGT TCGTTCAGGC GCATCAGTGC
GGTCGGCTCG ATGAAATGTT TGTGCAGCGC GAGGGCTGCT CCATCCACGG GACCACTAGC
CTCTATTTCG ATGATACCGG CCGCGTGACC ACCGCGCGGT GGCGCTGCCG GCAATGCGCT
GGGGCGGAAG TAGCCCGGTT GCGCCAAACG CCGTGCAACT GTTCCTACAG CCTGCTCGGG
ACCGAAGATC CCTCGGAGAA GCGACTACGC TTCTTGCCCG TCACCGATCC GGCGGTGTTT
AAGCCCCAAA TCGCTCCATT CATCAATTTT CCGCACGACG ACATGGCGCG GCTCTCCGGG
CCGGAAGCCC GGCCATGGGT TCTCGCGCGC ATTTGGGGTC TCCTCGCAAC CCCCGTGCGG
GACGCGATGG CGGCTGGCAG TACCAGCGAT GAGGATCCCA TGGTGGCGGC CGCCTTTCGC
GACCTCGCGG CCCTCGCACC TGATAATCCC CGAGTCCGAG AATATACCGC CCGGCGGACG
GCGCGTCACG CCGGCGCCGC TGTAGCCGAT CGGATGTTGC GGTTGGTGCC GGGCGCCACG
CCGCAAACCC TCCGTGTCAG TCGCCGACTC CTCGAACAGG TTGCCGTCCT CGACAATGTC
GCGACTCTGA CGATCGACGC GGCGGCGCAA CGGGCCGCGA ATCGGGGCGA CGAACCGCAC
GAGCGCCGCT TACGCGATAT CCAAATCTGG GCTCGCGAGC GCCTGGGCCT GGCCGAGTTG
CGGGCGCTCG ATGGTTTTCC GATCGGTCTC GCCGCGGTCG GCTTCACCCG CATCAAGGCG
GACCCGAACC AGACCATTCT GAACCCTTTT CCGCAATACA ATCGCCGGAC GCCGCTCTAT
GCTGTAGTCG CCGAAACCGA GGCGATCTAT TTCCAGTTGG ATCCCCAGCG GGTTGTCCGC
TGGCTCCAGC AAAATCAATT GCTGCCCACG GCGCCGCTCG CGACAAACGA GGAGGCTTGG
GCACGGCTGT ATGGCGAGGT GCCCGGATTG GGCCTGCGCC GGAACGATCC CCTGTTCCAG
CAACCGGCCG CGAGCGCCGT GCGAACCTTG GTGCATTCGA TAAGCCATGT CCTCCTGCGC
CACATCGAAT GGAGCGGGTA TGCCGCCCAG AGTATCGGCG AGTATCTGAT TCCCGAGGGT
ATAGCCTGCG TCCTGTATGC CAGCCGGTAC ACCGATACGC GGGTCGGCGG GCTCCTCACG
TTGTTCGAGC AGGGTATCGA CCGCTGGTTA CGCAGCGCCC TCGACGAGGG CGGCGATTGC
GTGCTGGACC CTTTCTGCAG TGAGGAAGGC GGCGCGTGCG TCGGCTGCCT GCATCGCGAA
TTTAACTGCA CCGAGTTCAA CCGTGAATTG TCCCGCGCCG TCTTGTTCGG CGGCACGGTG
GCGCAACACG GCCCGGCCCT CGTGCCGTTC GGCCCCAACG TATCCGGCTA TTGGAGGATG
TAG
|
|---|
| Protein sequence | MNFNRGKVQI LYGYLPGAVF AHDEYGHCRV TMIELSALGQ INRAALAEVV GDMLNQWPND
WQRQAFPAVR NADDLARNYF VGEPTGVKFE PFPTALRCPR CGRVYRLRDL QRSTATPGQC
PLVGCGGKLE QMPFVQAHQC GRLDEMFVQR EGCSIHGTTS LYFDDTGRVT TARWRCRQCA
GAEVARLRQT PCNCSYSLLG TEDPSEKRLR FLPVTDPAVF KPQIAPFINF PHDDMARLSG
PEARPWVLAR IWGLLATPVR DAMAAGSTSD EDPMVAAAFR DLAALAPDNP RVREYTARRT
ARHAGAAVAD RMLRLVPGAT PQTLRVSRRL LEQVAVLDNV ATLTIDAAAQ RAANRGDEPH
ERRLRDIQIW ARERLGLAEL RALDGFPIGL AAVGFTRIKA DPNQTILNPF PQYNRRTPLY
AVVAETEAIY FQLDPQRVVR WLQQNQLLPT APLATNEEAW ARLYGEVPGL GLRRNDPLFQ
QPAASAVRTL VHSISHVLLR HIEWSGYAAQ SIGEYLIPEG IACVLYASRY TDTRVGGLLT
LFEQGIDRWL RSALDEGGDC VLDPFCSEEG GACVGCLHRE FNCTEFNREL SRAVLFGGTV
AQHGPALVPF GPNVSGYWRM
|
|---|
| |