| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1165 |
|---|
| Symbol | |
|---|
| ID | 6205826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1458136 |
|---|
| End bp | 1458777 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641690808 |
|---|
| Product | NAD(P)H dehydrogenase (quinone) |
|---|
| Protein accession | YP_001818053 |
|---|
| Protein GI | 182412987 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.557218 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTC TTCTCGTTCT GAACAGCAGC GGCCGCGTTA CGCGTTCACT CACGCGCCGG
CTCACGTCAC GCTTCGCCGA AGCGTGGTCC GCCGTGCATC ACGACGCCGT CGTGGTCCAG
CGCGACCTCA CGCTTAATCC TCCACCTACG ATCAACGAAC CGTGGATTGT CGCAGCTTTC
GCCGCGCCCG ACACGCCGGC GACGGTCCGC GAGGCGGTGC TGCGGGCGAG CGACGAACTG
CTCGATGAGC TGACGGCCGC GGATGCGGTC GTGATCGGCG CACCGGTCTA CAACTTTGGA
TTGCCGGCGC AGCTCAAGGC CTATGTCGAC CAGATCGTGC GCGTTGGGCG CAGCTTCGCG
CTTACGGGCG ATGCTGCGGT GCCTTATCGT GCGCTTCTGG CTCCGAAGCC CGTGGTGGTC
ATGACCGCCG CCAGTGATGG CGTGATGCTG CCGGGCGGCG CGTTGGCCCA TCTCAATCTG
GTCGAACCGC ATCTTACGGC GGCGCTGGGC TTCATCGGTC TGACCGACGT GCGCTTTGTG
CGGGTAGCGG ATTCGGTCGC GGACCAGGCC GCCCATCCGC ATTCGCTGGC GGCAGCCGAG
CGCGCGATCG AGATGATCCT GCCTCGACTC GCCGCCGCCT GA
|
|---|
| Protein sequence | MKTLLVLNSS GRVTRSLTRR LTSRFAEAWS AVHHDAVVVQ RDLTLNPPPT INEPWIVAAF
AAPDTPATVR EAVLRASDEL LDELTAADAV VIGAPVYNFG LPAQLKAYVD QIVRVGRSFA
LTGDAAVPYR ALLAPKPVVV MTAASDGVML PGGALAHLNL VEPHLTAALG FIGLTDVRFV
RVADSVADQA AHPHSLAAAE RAIEMILPRL AAA
|
|---|
| |