| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1164 |
|---|
| Symbol | |
|---|
| ID | 6207016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1456711 |
|---|
| End bp | 1457928 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641690807 |
|---|
| Product | peptidase M48 Ste24p |
|---|
| Protein accession | YP_001818052 |
|---|
| Protein GI | 182412986 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.623088 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCCC AACCCCCGCC CCTCGCGCCG ACGGCTCCCG TCGGGCTCAC GCCTGCGAAC
CTCACCGTCC CGAAGGAAGC CAGCCGGTTC GTCATCGTCC TCATCCTGTC GATCCTCGTT
TGGCTCGCGC TGGCCGTGAC GATGATCGGG CTGTTCTATG CGGTGATCTT CGGCTTCTTC
CTCTGGCTCG GCAACGGACT GTTGACGGCT TACCTGCGGG CCGAGGCGGT GCGGGTCGGA
CCGGAGCAAT TGCCGGAACT CGACGCGAGC CTGCGCGACG TCTGCCAGAA GCTCGGCGTG
CGCGACGTGC CGGCGCTGTA TGTGCTGCAA TCCGGCGGAC TGCTCAACGC GTTCGCCACA
CGGTTTGCCG GGCGTGATTT CGTGGTGGTG TATTCGGACT TTCTGGAGGC GCTCGGACCG
GCGTCGCCGG AAATGCGTTT CATCCTCGGC CACGAATTGG GGCACATTCA GAGCCGGCAT
ATTTTGAAGC AGATCTTTCT CGCGCCGGGA TTGTTCTTTC CCCTCATCGG CCCGGCCTAC
CGCCGCGCGT GGGAGACTTC CTGCGACCGG TTCGGCGCCT ATGCGGCGCA GGATGTGAAT
GCCGCCGTGC GCGCGATGCT GGTGCTGAGT GGCGGACGCG AGCATGGTCC GCAGCTCAAC
GCCGCCGCTT TCGCAAGTCA GCACGCCTCC GAGCGCGGAT TCTTCGTCTC GTTGCATGAG
CTCACCTCGA CGTATCCGAC GCTGTCACGG CGCGTGACAG AACTGATGGC GTTGACGGAC
GACCGCGCGA TACGCAGCCC CGGGCGGAAT CCCTTCGCGT ACTTTTTCGC GCTGTTTCTA
CCCGGCGGAA ACGTCGGGCA GGGCGGCCCG TTGGCGAGCC TGCTGCTGAT CGTGGTGATC
ATCGGGCTGC TCGCGGCGAT GGCGATTCCG GCGTTTGAAA AGGTTCGGCA GCGTTCGCAG
GCGATCGCCT GCGTGAACAA CCAGCGGCAG CTCGCAGCGG CACTCGACCA ATATCAGCTC
GAGGAGGGCA AGGGTGCGGA CGCCTGGTCC GATGTGACCG GCGCGGGAAA ATTCGTACCG
GCCATGCCCG TGTGTCCGGC CGGCGGCACC TACAACGCCA CCTACGAGGA CAAGGGCGCG
CGTGTCATCT GCACCGTCGC GGGCCATGAT CCCACGAGCG TAGCCGCGGC GCGCGGCGCA
AGAAGCGGCG GAAAGTAA
|
|---|
| Protein sequence | MTPQPPPLAP TAPVGLTPAN LTVPKEASRF VIVLILSILV WLALAVTMIG LFYAVIFGFF
LWLGNGLLTA YLRAEAVRVG PEQLPELDAS LRDVCQKLGV RDVPALYVLQ SGGLLNAFAT
RFAGRDFVVV YSDFLEALGP ASPEMRFILG HELGHIQSRH ILKQIFLAPG LFFPLIGPAY
RRAWETSCDR FGAYAAQDVN AAVRAMLVLS GGREHGPQLN AAAFASQHAS ERGFFVSLHE
LTSTYPTLSR RVTELMALTD DRAIRSPGRN PFAYFFALFL PGGNVGQGGP LASLLLIVVI
IGLLAAMAIP AFEKVRQRSQ AIACVNNQRQ LAAALDQYQL EEGKGADAWS DVTGAGKFVP
AMPVCPAGGT YNATYEDKGA RVICTVAGHD PTSVAAARGA RSGGK
|
|---|
| |