| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1163 |
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| Symbol | |
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| ID | 6206122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1455329 |
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| End bp | 1456576 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641690806 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001818051 |
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| Protein GI | 182412985 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.235509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCT GGCTCCGCCA CACGCGACAG CTCTTCCAGC AACCCGGCTT TACCGGTTTG
CTCGCGGCGA CCTTCGCGCT GGGCATGGGC TTTTCGTTCG TCTTTCCGTT CCTCTCGCTG
TGGGGCACGC AGGCGGTCGG ATTCACGCCT TTTCAGTTCG GCGTGTTCAT GACGCTGACG
TCGCTCAGTT CCGTGTGCGT CACCACGCTG CTCGCCCGCT GGTCCGACAC GCACGTGCCC
CGCAAGGTGA TGCTGTTGCT CGGCAGCGCG TCGGGCGTGC TGGGCTACAC CGGGTTTGCG
CTCACGCGCC AGCCGCTCGT GCTGGTCGGG CTCGGCGTGA CGCTCGTGGC GTTCGCCTCA
ATTTGTTTTT CCCAATTGTT CGCCACGGCG CGCGACTGGT TCGCCGTCGA GGGGGAGGTC
ACCTCCGATG TGGCGATCAC GTTGAGCGTG GTGCGGGTGT GCTTTTCGTT CGCGTGGACC
GCAGGCCCCG CGCTCGGCGC GGCGATTGTC GCGCACTTCG ATTTCGTCGG GCTCTTCGCC
GGGGCTGCGG CCCTGTATCT GCTGTTTCAC CTCGGCGTGT GGCGGTTCGT GCCTTATCAA
CGCCGCCCGG CGCACGTGGT CGCCGCCGCC GGACGCGTCT CCGTCTGGCG AACACTCCGG
CGGCCCGATC TGCTCGGCTA CTTCGTCGCG TTCGTGCTGG TTTTCGCGGC GTTCGCGATG
AACATGATGA ATCTGCCGCT CGCGATCACC CACGAGCTTG GCGGCACCGC GGGGGATCTC
GGTCTGGTGT TTGCCGTGGG GCCGGCGGTG GAAATTCCGC TGATGTTGTG GTTCGGCCAG
CTCGCCGCGC GGGGACACCA GCTGGTGTTG ATTCGGCTCG GCGGCTGCAC CAGCGCGCTC
TACTTCGTTT TGCTCTTCAC CGCCACGGAG GTCTGGCACG TGTGCCTGAT GCAGATGCTG
AGCGGCATGT CGCTCGCGAT CGTCGGCAAC GTCGCGATCA CGTTTTTCCA GGATCTGCTG
CCCGAACAGC CCGGCTTGGC GACCACGGTC TTCGCGAACT CCTCGAGTCT CGGCAATCTC
GTCGGTTACG TCGCGTTCGG TGCGCTCGCG ACGCCGCTCG GCTCACACGG GCTTATCGGC
GCCTGCGCGC TCATCGCCAT TGTCGCGAGT CTCGCGCTGC TTTGGCTCCG CCCGGGCCGG
CCGGCCCCGG CCGCTGCAAC CGTTCCTGTA GGAATCGCGC GACCCTGA
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| Protein sequence | MSSWLRHTRQ LFQQPGFTGL LAATFALGMG FSFVFPFLSL WGTQAVGFTP FQFGVFMTLT
SLSSVCVTTL LARWSDTHVP RKVMLLLGSA SGVLGYTGFA LTRQPLVLVG LGVTLVAFAS
ICFSQLFATA RDWFAVEGEV TSDVAITLSV VRVCFSFAWT AGPALGAAIV AHFDFVGLFA
GAAALYLLFH LGVWRFVPYQ RRPAHVVAAA GRVSVWRTLR RPDLLGYFVA FVLVFAAFAM
NMMNLPLAIT HELGGTAGDL GLVFAVGPAV EIPLMLWFGQ LAARGHQLVL IRLGGCTSAL
YFVLLFTATE VWHVCLMQML SGMSLAIVGN VAITFFQDLL PEQPGLATTV FANSSSLGNL
VGYVAFGALA TPLGSHGLIG ACALIAIVAS LALLWLRPGR PAPAAATVPV GIARP
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