Gene Oter_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1162 
Symbol 
ID6207204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1453039 
End bp1454961 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content64% 
IMG OID641690805 
Producthypothetical protein 
Protein accessionYP_001818050 
Protein GI182412984 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.144163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCG ACATCATCCG CCGCGAATGG CTCCGCGTTC CCGGCTTGGC GCTGCTGCTG 
ACGATCGGCC CGGTGTTCGC CGCCGAGCCG CCCACGTCCG CAGCCGATCC CGCTCCGGCC
GGCGACCGCG CGGCGCAGAG CGACAACGAA GCCATCGTTT CGACCACGCC GATGGAGTTC
GAATCGGAGA ACACCGGCGT GTATGGGCAG CTGACCGTCG CCCCGGAGAT TCTCAGCGCC
GACACGCGCA ACGATCTGGT CTACACGATC ACGGCTGAAC CGTTGCATGG CCGGGTGGGC
CTCGCCAGCG CCGGCGAGGA GGCAGACTTT TTCAAAACCA AGACCTCGCG GCTCGGCTAT
TTTGTCTATC GGCCGCAGGA GGATTACGCC GGCGAGGACT CGTTCGACTA CACGGTGCGC
AACGAAACGT CGGGGCTCGT GTTCAAGAAC ACGGTGGTGC TCGCGGTGAA ACCGCCGCCG
CCGGTAATGC TGCAGAGGTT CGACGTCGAG GCGACCCGGG AACGCTCATT AAAAGTGCAG
GAGGTCGCCC TCTCCACTCG CCCCAACCAG CCCGTCACCC AAAAAGTTCC GAGCCACGAG
GATTTCCTCA CGCCGGCCGA CCGCGTGGGC ATCGCCCCGC CGAAGGTTGC GTACCTGCTC
GACGACAAGG CCAAGCCGCA GAACGGCACC GCGAAGCTCG ACCGGCTTAC GGGCCAGCTC
ACCTACGCGC CGAATCCCGG TTTCATCGGC GAGGACCGAT TCCGCTACTA CACCGTCGAC
GAGGCCAATC CCCACCTGGG CGCGGAAAAC GTCGTCTCAG TCCACGTCGA GCCGATCCGC
ACCGTGAAGC ACGTGGTGGT CGATCGCTCG CGCAGCCGCG AGGTGGATCT CGTGTTCGTC
ATCAACAATT CGCCCTCGAT GGCGGCGCAC CAGAGCCGGA TCGCCGCCAA CCTGAGCCGG
TTTCGGCAGC TCTTTCACAC GCGTGATCTC GACTACCGCA TCGGCGTGCT CACGACCGAC
TTCGTGGACG CGGATCCGCG GTTTTCGCGC GCCGACCAGC AGTTTTTCAA GGAGGTCCGT
TCGATCCAGC TCAACCGCGC CGGCCAGCCG GTGCTCGACC GCCGCGGCCG GCCGAAAACG
ACGACCAAGC GTGTCGCGAG CAACGGCACA CTCGTGACGC TACCGGTGAT GGATCAGCCG
TGGGTCACGC CGCGCACGCC CGACGGCATT TTCTCCGAAC TCGTCAAGGT CGGCACAAAC
GGCGACAGCA ACCGCACCGC GTTCACCTCC GTGTACAATT TCGTCGCCGG CTATTACAAC
AAGGAGCACG CGTTCCTCCG TCCGGAAGCG CCCACGATCG TGGTTTTCTT CATGGACGAG
GAGGAAACCC GCATGGCCAC CTGGAAGGAA CAAGCCGACG GCAAGCGCGA GGCCGAGTGG
ATCGAGAACG GCAAGCTGCC CGACTTGCTC AAGCAATACA ACGCGCGCAA CCCGCAGAAA
CGCCAGACGC TCGACGGCTA CATCAACTAC TGGGTCTTGC GCCCGTTCAT CATCGCGAAG
GGGAACAAAC GCGGAAAGCT CGAGATGCAC GCGGTGGTGT CACCCAACAA CATCTCGCAC
CGCCGCGCCG CCGAGCTCAC GGGCGGGAGC GTGCTCAACA TCGAGAGCGA CTTTTCCGGG
CCGCTCGCCG CGCTCGGTGA TCGTATCGCC GAGACCGTCG CGGTCGCGCT CGATCCGGTT
GCGCCGGGTG CAACGCTCTA CCGCAAGAGC CTGCGCGTGC TGGTCGACGG CGACGAAGTG
CGGCCCGACG CGGAGAACGG CTACGTGTAC GACGAACTCA CCCACAGCAT TCGGTTCCAA
GGCGCCGCCA AGAAGAAGGC GTTCCTCGCG AAGATCGACA TCACCTACGA GGAGCACATG
TAA
 
Protein sequence
MSLDIIRREW LRVPGLALLL TIGPVFAAEP PTSAADPAPA GDRAAQSDNE AIVSTTPMEF 
ESENTGVYGQ LTVAPEILSA DTRNDLVYTI TAEPLHGRVG LASAGEEADF FKTKTSRLGY
FVYRPQEDYA GEDSFDYTVR NETSGLVFKN TVVLAVKPPP PVMLQRFDVE ATRERSLKVQ
EVALSTRPNQ PVTQKVPSHE DFLTPADRVG IAPPKVAYLL DDKAKPQNGT AKLDRLTGQL
TYAPNPGFIG EDRFRYYTVD EANPHLGAEN VVSVHVEPIR TVKHVVVDRS RSREVDLVFV
INNSPSMAAH QSRIAANLSR FRQLFHTRDL DYRIGVLTTD FVDADPRFSR ADQQFFKEVR
SIQLNRAGQP VLDRRGRPKT TTKRVASNGT LVTLPVMDQP WVTPRTPDGI FSELVKVGTN
GDSNRTAFTS VYNFVAGYYN KEHAFLRPEA PTIVVFFMDE EETRMATWKE QADGKREAEW
IENGKLPDLL KQYNARNPQK RQTLDGYINY WVLRPFIIAK GNKRGKLEMH AVVSPNNISH
RRAAELTGGS VLNIESDFSG PLAALGDRIA ETVAVALDPV APGATLYRKS LRVLVDGDEV
RPDAENGYVY DELTHSIRFQ GAAKKKAFLA KIDITYEEHM