Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1154 |
Symbol | |
ID | 6204957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1438928 |
End bp | 1444903 |
Gene Length | 5976 bp |
Protein Length | 1991 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641690797 |
Product | Ig family protein |
Protein accession | YP_001818042 |
Protein GI | 182412976 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02608] delta-60 repeat domain |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.525003 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATTG CTTCTGTTTT TCGCCCCGTG CTGCTCGTCC TGGCCCTCTG CGGGGCAGCT TTGTTTCCAC CGGCGGTGCT GGGCCAAGTC ATGGGCTCGA CAGCGGCGGA CGGGTTCAAC CCCAACGTCG ACGGCACCGT CTACGCCGTC GTGATCCAGC CCGACGGCAA GGTGCTGGTC GCGGGTAACT TCACGGCGAT TCAGCCAACG GGATCGTCCC GGCCGATCCC GCACGCCAAT ATCGTGCGAC TGCTGCCCGA CGGGCGCGAG GACGGCACGT TCAACGTCAA CGTCAACGGC CAGGTCAGCG CGCTGATCCT GCAGCCGAAT GGCCAGATTG TGATCGGCGG CAAGTTCACC TCCGTCGCGG GCGTGACGCG CCGCCGGGTC GCGCGCCTCA ACGCCGACGG TTCGCTCGAT GCGACGTTCG ATCCCAACAT CGAACCCCGC ACCGCGGACG AGGGCGGTTC ACTTACGCCG GAAGTGACGA GCCTGCTGCT CCAGTCGGAC GGCAAGCTCG TCGTTGGCGG CGGGTTCAAG GCGGTGCAGC CGAACGGCGC GGCGACGTTC ACGCTCCGCA ACCGGCTCGC GCGATTCAAC AGCGACGGCA CGCTCGATGC GGGCTTCGAT CCCAACGCGA ACAACATGGT GCTGTCGCTC GCGCTGGAGC CCGACGGCCA GATTCTCGTG GGCGGCGGCT TCACCACGCT GCAGCCCAAC GGCGCGGCCG CGACCACCGC GCGCAAGCGC ATCGCGCGGC TCAACGTCGA TGGTACCGTC GATCCGACAT TCGATCCGCA GGCGAACAAC GCCGTATCGG CGATCCAAGT GCTGCCCGGC GGAAACATCC TGATCGGCGG CACGTTCACG GGCCTGACCC CGAACGGCGT CACGCTCGAC GCGTCCGCCG GCGCGATGAC CCGGTTGGCG CGGTTGAACG CTGACGGCAC GCTGGTCACG AGCTTCTCTG GTTTTGCCGA CGGGCCGGTC TCGGTCATCA CGCTGCAGCC GGACGGCGCG ATCCTGGTGG GCGGGTCCTT CACGGCCGTG GGCAACGGCT CGTCCAGTTA TGTCGGCCGG CTGCTGCCGA ATGGCGTACT CGATACGACC TTCCTGCCGG GGCCAAACTA CGCCGTCTAC GCGATCGCCG TGCAATCGAA CGGCTCGGTG CTGCTCGGCG GCGCCTTCCT GACGCTGCGC GGACAGGGGC GGACGTCGGT CGTCCGCAAT CACCTCGCGC GGGTTTCGTT CCGCGGCGCG CTCGACACGG ATTTCCGGCC CGACGTGAAC GGCCGCGTAC GTTCGCTGAT CAAGCTGAGC AACGGCCAGT GGCTCGTGGG CGGCACGTTC ACCAGCATCG CCGGCCAGAC GCGCAACGGC GTGGTGCTGC TGAACGCCGA CGGCAGCATC GATCCGCGGT TCAAGGCCGA CATCAACGGC CCGGTGATCT CCGCCGTGCA GGTTAGCGCC ACGCAGATCA TCGTGGGCGG CTCCTTCACG CGGATCAACA CGGTGGCGCG CCCGTATCTC GCGAAACTGA ATCTCGCCGA CGGATCGGTG GACGAGGCGT ACAGTCCCGC GCCGAACAAC CAGGTGAACG CGATGGTGCT GCAGGGCGAC GGCAAGCTGG TGATCGGCGG CGCGTTCACG ACGCTCAGTC CGTTCAGCAC GACCGAGCCG GTGTCGCGCA ACTGCCTCGC GCGGCTCAAC GCCGACGGCT CGGTCGATCT CGCCTTCAAA GCGCAGGCCA ACGACGCGAT CGTCGCGATG GCTGCCGCGT CCGACGGCCA GATCCTCATC GGCGGACCGT TCTCGACGGT GGTGGGCAGC GCGGACACGC GCGCGACCAC CCGCTACGGA CTCGCGCGGC TCAACGCCGA CGGCGCGCTC GACACCGGCT TCAACCCGAA CGTCAACGGC ACGGTGGCCG CGATCGTCGT GCAGTCGGAC AACAAGATCG TGTTCGGCGG TGCGTTCGCG GTGCTCGCGC CCAACAGCGA TACCACCGCC ACGACCCGCA ACAATCTCGC GCGGGTCGAA GCCGACGGCA GTGTGGACAA AACCTACGAC CCGAATCTCA ACGGCCAGGT CAGCACGCTC GCGCTGCAGG CCGACGGCAA GGTGGTCGCG GGCGGCCGGT TCTCGGCGCT GAAGCCGAAC GGCATCGCCG ACGGCTACGA GCGCAACTAC GTCGCGCGGA TCAACACCGA CGGTACGCTC GACCAGGATT TCAATCTCTA CCTCGACACG ACGATCGGCA ACGAGGTGAT GGGCCTCGCG ATCGCGGCCG ACAACAAGAT CGTCGTCGCC GGGACGTTCG CGCAGGCTGG CGTCAACGCG GTGCCGCGCT CGCGCGTGCT GCGCGCGGAG GCGAACGGCG CGATCGACAC GAGCTTCAGC GCCGACCTCA GCACGATCGG CGGCGCGGAC ATCCGCGCGA TCACGCAGCA GTTCGGCGGC GCGGTGATCG TCGCCGGCAA CTTCGCCGGG TTCGGCGGCA CGAGCGGCGC GAACCTCGCG CGCTTCTATG CCGACAGCAC GCCGGACACG AGTTTTGTGC CGAGCTTCAA CGGCCCGGTT TACGCCATGG CCGAGTCGCC GGCCAAGGGG CTGCCGGTCG CGACGCAACG CAGCGGCTTC GCCTGGTTCG AGACGAACGG CGCGCTGCGC AGCGGCTTCC ATTTCAGCTC CGAGGTGACC TCCATCAGTT CGATTCGGGC GGTGACGGTC GACTCGAATG GCAAGATACT CATCGCGGCG ACCTTCGACC TCGGCGGCAA TTCCCGCTCG CTCGTTCGTT TCAATCCCGA CGGCACGATC GACTCGACCT TCACGCCGGT AACCACCACC GGCACGGCGT CGAGCGGCAC GAGCACCGGC ACGATTTATG TGATCCGGCC TTTGGCGGAC GGGAAAATTC TGATCGGCGG CTCGTTCAGC GCCATCAACA CAACTTCACG CAACTTCCTC GCGCGGCTCA ACGCCGACGG CCAGCTCGAC ACCTCCTTCG TCGTCTCGCC GGACAACGAG GTCTATTCCC TCCTGATGCA GTCGGACGGG AAGCTCGTCG TTGGCGGCAA CTTCTCCTCG ATCACGGCGA GCGGCGCCTC GACGGCCGCC GGGCGCAACG GCATCGCGCG GCTCAACGTG GATGGCACGC TCGACACCGG CTTCTATCCA AACCCGAACG GCCAGGTGCA GGTGATCCTC CCGGTGGCGG ACGGCAAGCT GCTGATCGCG GGCGGCTTCT CCGGACTGTA TCCGAACGGC ACGACCACGG TCGTGGATCG CAGCTTCGTG GCGCGGCTCA ACTCCGACGG CTCCGTTGAC ACCACCCTCG ACCTCGACGC GAACAGCTTC GTCAGCGCCG GCGTGCTTCA GCCCGATGGC AAGATCGTCC TCGGCGGGTA TTTCACCACC ATGGGTGGCA CGACGCGCAA CTATGTCGCG CGGCTCAAGG CGGACCAGAC GCTGGACGAC ACCTTCAATC CCAACCCGAA TGGCATCGTC AGCACGGTTG CGCTCCAACC GGCGGACAAC AAGATCGTCC TCGGCGGCAC CTTCACCGCG CTCCAGCCCG GCGGCACGAC CTACAACGCC TCGCTCGCGA CGCCGCGCAA CCGGCTCGCG CGGCTCAACA GCGACGGCAC GGTGGACCCG CTGTTCAATC CGAACGTCGA CGGGCAGGTC ACCGCGCTTG CGGTTTACAC CGATGGCTCG CTCATCGCGA CCGGTGCGCT CACGAACGTG CAGCCCTCGG GCTCGCTGAT GGTCGGCGGC GCGTTCACCC AGATCAACGG CACGCCGGCG AACAACTTCG CCAACATGAG CAGCGATGGC TCGATCAGCA CGGCGTTCCT GCCGAATCCA AACGGCGCGG TCAACGCCCT GCTCACGATC GCGGACGGTC GCACGGTCGT CGCTGGCGCG TTCACCCAGA TCGCCGGCGC GACGCGCAAC CGGGTCGCGC GCTTCAACAC TGACGACTCG CTCGACGCGA ACTTCAATCC GAACGTCAAC GGCGAGGTGC TCGCGCTCGC GCTCGAGCCC GACGGCGACC TGCTCATCGG CGGCGATTTC ACGCAAGTCG GCGGAGTTGC GCGCAACAAG CTCGCGCGCG TCAAGGCCGA CGGCAGCCTC GATGCTTCGT TTGCCCCGAC AGTGCCCGGC GCGGTCAGCG GTCTCGCGGT CGACGCGAGC GGCCGCATCG TGGTCCTCGC GGCTGGCAGC GGCGTGCGCA GCGTACTTTT GCGGCTCACC GCGGATGGCG CCGCAGATCC GAGCTTCACG ACCGTCAGCA GCGCGACCGC CATCAACTCG TTCGCTTTGC AGACCGACGG CCGGATCGTG GTCGGCGGCG CCTTCACCAG CATCGCCGGT GAGACGCGCA ACTACGTCGC CCGCTTGAAC GCGAACGGCA CGATCGATCC CACGCTGACC TCGAACCCGA ACGGGGAGGT GACCGCCGTG CTGCTCCAGC GCGACGGCAA GGTGGTGATC GGTGGACGGT TCAACCAAGT CGACGGCTTG GCGCGCGCCG GTCTCGCGCG CATCGCCACG ACTTCGTCGA ACACGGGCGC CGTGGCCTTC ACGACGAATG CCGCGCGCAA CGCCGTTACC TGGGTGCGCT CGGGCGTGGC GCCGGAAATT TCCAGCGCGT ATCTCGAAAC GTCGGCGGAC CTCGCCACTT GGACGACGCT CGGCCAGGCC ACCCGCGTGC CGAACTCGAC CAACTGGCAG GTGACCGGCG TCACGCTGCC GACTGATCCA ACCACTCCGG TTTACGTTCG CGCCAGCGCG ATCGTCGGTT CCAACCCGCA AAGCTCGACG GGCTTGATCG AGGCGCAGGG GCGCCTGAGC GCGGCCCTGC CGAGCATCAC CAGCGCGGGC GTGGTCGCGG CAGCGGCGGG ATCGAATTTC CTCTACGCGG TCACGGCGAC GGAAAGTCCG ACCACCTATG TGGCCAGCGG ACTGCCACCG GGGCTTGCCA TCAATTCCGC CACCGGCCTG ATCACGGGCA CGCCGACGCA AACCGGCACT TACAATGTCG TGGTGGGTGC GACCAACGCC GCGGGCACCG GCACCGCCAC GATCACGGTG GTCGTAGCCG ACGGTACGAC CCAAACGAGC CGCGTGACCA ATCTCTCCGT CAACACGCGA ATCGTCGCGT CGAATACAGT GGTCATCACC GGCTTCGTGA TTTCCGGCAC CGGGGCGCAG ACGGTGGTGT TGCGCGCGGT CGGCCCGGGT CTGACCTCGC TGGGCGTGAA CGGCGTGCTC GCCACGCCGC AGCTGCAGCT CTTCAACTCG AATGGCCAAA CGCTGCTGAC CAACGGTCGG TGGGGCGGCG CCAGCCAACT CACGACGGAG TTCGCGCGGC TTGGCGCTTA CCCGCTCAAC GCCGACAGCG AGGACGCGGC CGTGATCGTC ACGCTTACGC CCGGCGTCTA CACGATGCAC GTGGGCGGAG AGAACGGGGC CACCGGCACC GTGCTCGCGG AGGTCTATGA CGCCTCGGCC ACGCCGCCGC CCGCGAACCA GCCGAAGCTG GTGAACATTT CCGCGCGCGG CGTCGCTTTG GCCGGGCAAC CCATCACGGG TGGCTTTGTC ATCGCCGGCC AGACCAGCCG GCAGGTGCTG ATCCGCGGCG TCGGCCCGGG CCTCACGGCG CAGCAGGTGC CCGACGTGCT CGCGAATCCG AAGCTCACGC TCTATCGAAT CCAATCCGGC AACGCGACGG TCATCGCCCG CAACGACGAC TGGCAGACGC CCGAAACGGC CGTGCAGGAT TATCCGGGTT CGACCGGCGC GGCCATCTCC GCAGCCGCGA CGACCACCGG TGCGTTTGCG CTGAACTCCG GCAGCAAGGA CGCGGCGATC CTCGTCACGC TGCCGCCGGG CGTCTACACC GCCGAGGTTA ACGGCGCGGA TGGCGGCATC GGCGCCGCCA TCGTGGAAGT CTACGAGCTG CCGTAA
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Protein sequence | MPIASVFRPV LLVLALCGAA LFPPAVLGQV MGSTAADGFN PNVDGTVYAV VIQPDGKVLV AGNFTAIQPT GSSRPIPHAN IVRLLPDGRE DGTFNVNVNG QVSALILQPN GQIVIGGKFT SVAGVTRRRV ARLNADGSLD ATFDPNIEPR TADEGGSLTP EVTSLLLQSD GKLVVGGGFK AVQPNGAATF TLRNRLARFN SDGTLDAGFD PNANNMVLSL ALEPDGQILV GGGFTTLQPN GAAATTARKR IARLNVDGTV DPTFDPQANN AVSAIQVLPG GNILIGGTFT GLTPNGVTLD ASAGAMTRLA RLNADGTLVT SFSGFADGPV SVITLQPDGA ILVGGSFTAV GNGSSSYVGR LLPNGVLDTT FLPGPNYAVY AIAVQSNGSV LLGGAFLTLR GQGRTSVVRN HLARVSFRGA LDTDFRPDVN GRVRSLIKLS NGQWLVGGTF TSIAGQTRNG VVLLNADGSI DPRFKADING PVISAVQVSA TQIIVGGSFT RINTVARPYL AKLNLADGSV DEAYSPAPNN QVNAMVLQGD GKLVIGGAFT TLSPFSTTEP VSRNCLARLN ADGSVDLAFK AQANDAIVAM AAASDGQILI GGPFSTVVGS ADTRATTRYG LARLNADGAL DTGFNPNVNG TVAAIVVQSD NKIVFGGAFA VLAPNSDTTA TTRNNLARVE ADGSVDKTYD PNLNGQVSTL ALQADGKVVA GGRFSALKPN GIADGYERNY VARINTDGTL DQDFNLYLDT TIGNEVMGLA IAADNKIVVA GTFAQAGVNA VPRSRVLRAE ANGAIDTSFS ADLSTIGGAD IRAITQQFGG AVIVAGNFAG FGGTSGANLA RFYADSTPDT SFVPSFNGPV YAMAESPAKG LPVATQRSGF AWFETNGALR SGFHFSSEVT SISSIRAVTV DSNGKILIAA TFDLGGNSRS LVRFNPDGTI DSTFTPVTTT GTASSGTSTG TIYVIRPLAD GKILIGGSFS AINTTSRNFL ARLNADGQLD TSFVVSPDNE VYSLLMQSDG KLVVGGNFSS ITASGASTAA GRNGIARLNV DGTLDTGFYP NPNGQVQVIL PVADGKLLIA GGFSGLYPNG TTTVVDRSFV ARLNSDGSVD TTLDLDANSF VSAGVLQPDG KIVLGGYFTT MGGTTRNYVA RLKADQTLDD TFNPNPNGIV STVALQPADN KIVLGGTFTA LQPGGTTYNA SLATPRNRLA RLNSDGTVDP LFNPNVDGQV TALAVYTDGS LIATGALTNV QPSGSLMVGG AFTQINGTPA NNFANMSSDG SISTAFLPNP NGAVNALLTI ADGRTVVAGA FTQIAGATRN RVARFNTDDS LDANFNPNVN GEVLALALEP DGDLLIGGDF TQVGGVARNK LARVKADGSL DASFAPTVPG AVSGLAVDAS GRIVVLAAGS GVRSVLLRLT ADGAADPSFT TVSSATAINS FALQTDGRIV VGGAFTSIAG ETRNYVARLN ANGTIDPTLT SNPNGEVTAV LLQRDGKVVI GGRFNQVDGL ARAGLARIAT TSSNTGAVAF TTNAARNAVT WVRSGVAPEI SSAYLETSAD LATWTTLGQA TRVPNSTNWQ VTGVTLPTDP TTPVYVRASA IVGSNPQSST GLIEAQGRLS AALPSITSAG VVAAAAGSNF LYAVTATESP TTYVASGLPP GLAINSATGL ITGTPTQTGT YNVVVGATNA AGTGTATITV VVADGTTQTS RVTNLSVNTR IVASNTVVIT GFVISGTGAQ TVVLRAVGPG LTSLGVNGVL ATPQLQLFNS NGQTLLTNGR WGGASQLTTE FARLGAYPLN ADSEDAAVIV TLTPGVYTMH VGGENGATGT VLAEVYDASA TPPPANQPKL VNISARGVAL AGQPITGGFV IAGQTSRQVL IRGVGPGLTA QQVPDVLANP KLTLYRIQSG NATVIARNDD WQTPETAVQD YPGSTGAAIS AAATTTGAFA LNSGSKDAAI LVTLPPGVYT AEVNGADGGI GAAIVEVYEL P
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