Gene Oter_1154 details

Gene Information

• Locus tag: Oter_1154
• ID: 6204957
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Opitutus terrae PB90-1
• Kingdom: Bacteria
• Replicon accession: NC_010571
• Strand: +
• Start bp: 1438928
• End bp: 1444903
• Gene Length: 5976 bp
• Protein Length: 1991 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 641690797
• Product: Ig family protein
• Protein accession: YP_001818042
• Protein GI: 182412976
• TIGRFAM ID: [TIGR02608] delta-60 repeat domain

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.525003
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCCATTG CTTCTGTTTT TCGCCCCGTG CTGCTCGTCC TGGCCCTCTG CGGGGCAGCT 
TTGTTTCCAC CGGCGGTGCT GGGCCAAGTC ATGGGCTCGA CAGCGGCGGA CGGGTTCAAC 
CCCAACGTCG ACGGCACCGT CTACGCCGTC GTGATCCAGC CCGACGGCAA GGTGCTGGTC 
GCGGGTAACT TCACGGCGAT TCAGCCAACG GGATCGTCCC GGCCGATCCC GCACGCCAAT 
ATCGTGCGAC TGCTGCCCGA CGGGCGCGAG GACGGCACGT TCAACGTCAA CGTCAACGGC 
CAGGTCAGCG CGCTGATCCT GCAGCCGAAT GGCCAGATTG TGATCGGCGG CAAGTTCACC 
TCCGTCGCGG GCGTGACGCG CCGCCGGGTC GCGCGCCTCA ACGCCGACGG TTCGCTCGAT 
GCGACGTTCG ATCCCAACAT CGAACCCCGC ACCGCGGACG AGGGCGGTTC ACTTACGCCG 
GAAGTGACGA GCCTGCTGCT CCAGTCGGAC GGCAAGCTCG TCGTTGGCGG CGGGTTCAAG 
GCGGTGCAGC CGAACGGCGC GGCGACGTTC ACGCTCCGCA ACCGGCTCGC GCGATTCAAC 
AGCGACGGCA CGCTCGATGC GGGCTTCGAT CCCAACGCGA ACAACATGGT GCTGTCGCTC 
GCGCTGGAGC CCGACGGCCA GATTCTCGTG GGCGGCGGCT TCACCACGCT GCAGCCCAAC 
GGCGCGGCCG CGACCACCGC GCGCAAGCGC ATCGCGCGGC TCAACGTCGA TGGTACCGTC 
GATCCGACAT TCGATCCGCA GGCGAACAAC GCCGTATCGG CGATCCAAGT GCTGCCCGGC 
GGAAACATCC TGATCGGCGG CACGTTCACG GGCCTGACCC CGAACGGCGT CACGCTCGAC 
GCGTCCGCCG GCGCGATGAC CCGGTTGGCG CGGTTGAACG CTGACGGCAC GCTGGTCACG 
AGCTTCTCTG GTTTTGCCGA CGGGCCGGTC TCGGTCATCA CGCTGCAGCC GGACGGCGCG 
ATCCTGGTGG GCGGGTCCTT CACGGCCGTG GGCAACGGCT CGTCCAGTTA TGTCGGCCGG 
CTGCTGCCGA ATGGCGTACT CGATACGACC TTCCTGCCGG GGCCAAACTA CGCCGTCTAC 
GCGATCGCCG TGCAATCGAA CGGCTCGGTG CTGCTCGGCG GCGCCTTCCT GACGCTGCGC 
GGACAGGGGC GGACGTCGGT CGTCCGCAAT CACCTCGCGC GGGTTTCGTT CCGCGGCGCG 
CTCGACACGG ATTTCCGGCC CGACGTGAAC GGCCGCGTAC GTTCGCTGAT CAAGCTGAGC 
AACGGCCAGT GGCTCGTGGG CGGCACGTTC ACCAGCATCG CCGGCCAGAC GCGCAACGGC 
GTGGTGCTGC TGAACGCCGA CGGCAGCATC GATCCGCGGT TCAAGGCCGA CATCAACGGC 
CCGGTGATCT CCGCCGTGCA GGTTAGCGCC ACGCAGATCA TCGTGGGCGG CTCCTTCACG 
CGGATCAACA CGGTGGCGCG CCCGTATCTC GCGAAACTGA ATCTCGCCGA CGGATCGGTG 
GACGAGGCGT ACAGTCCCGC GCCGAACAAC CAGGTGAACG CGATGGTGCT GCAGGGCGAC 
GGCAAGCTGG TGATCGGCGG CGCGTTCACG ACGCTCAGTC CGTTCAGCAC GACCGAGCCG 
GTGTCGCGCA ACTGCCTCGC GCGGCTCAAC GCCGACGGCT CGGTCGATCT CGCCTTCAAA 
GCGCAGGCCA ACGACGCGAT CGTCGCGATG GCTGCCGCGT CCGACGGCCA GATCCTCATC 
GGCGGACCGT TCTCGACGGT GGTGGGCAGC GCGGACACGC GCGCGACCAC CCGCTACGGA 
CTCGCGCGGC TCAACGCCGA CGGCGCGCTC GACACCGGCT TCAACCCGAA CGTCAACGGC 
ACGGTGGCCG CGATCGTCGT GCAGTCGGAC AACAAGATCG TGTTCGGCGG TGCGTTCGCG 
GTGCTCGCGC CCAACAGCGA TACCACCGCC ACGACCCGCA ACAATCTCGC GCGGGTCGAA 
GCCGACGGCA GTGTGGACAA AACCTACGAC CCGAATCTCA ACGGCCAGGT CAGCACGCTC 
GCGCTGCAGG CCGACGGCAA GGTGGTCGCG GGCGGCCGGT TCTCGGCGCT GAAGCCGAAC 
GGCATCGCCG ACGGCTACGA GCGCAACTAC GTCGCGCGGA TCAACACCGA CGGTACGCTC 
GACCAGGATT TCAATCTCTA CCTCGACACG ACGATCGGCA ACGAGGTGAT GGGCCTCGCG 
ATCGCGGCCG ACAACAAGAT CGTCGTCGCC GGGACGTTCG CGCAGGCTGG CGTCAACGCG 
GTGCCGCGCT CGCGCGTGCT GCGCGCGGAG GCGAACGGCG CGATCGACAC GAGCTTCAGC 
GCCGACCTCA GCACGATCGG CGGCGCGGAC ATCCGCGCGA TCACGCAGCA GTTCGGCGGC 
GCGGTGATCG TCGCCGGCAA CTTCGCCGGG TTCGGCGGCA CGAGCGGCGC GAACCTCGCG 
CGCTTCTATG CCGACAGCAC GCCGGACACG AGTTTTGTGC CGAGCTTCAA CGGCCCGGTT 
TACGCCATGG CCGAGTCGCC GGCCAAGGGG CTGCCGGTCG CGACGCAACG CAGCGGCTTC 
GCCTGGTTCG AGACGAACGG CGCGCTGCGC AGCGGCTTCC ATTTCAGCTC CGAGGTGACC 
TCCATCAGTT CGATTCGGGC GGTGACGGTC GACTCGAATG GCAAGATACT CATCGCGGCG 
ACCTTCGACC TCGGCGGCAA TTCCCGCTCG CTCGTTCGTT TCAATCCCGA CGGCACGATC 
GACTCGACCT TCACGCCGGT AACCACCACC GGCACGGCGT CGAGCGGCAC GAGCACCGGC 
ACGATTTATG TGATCCGGCC TTTGGCGGAC GGGAAAATTC TGATCGGCGG CTCGTTCAGC 
GCCATCAACA CAACTTCACG CAACTTCCTC GCGCGGCTCA ACGCCGACGG CCAGCTCGAC 
ACCTCCTTCG TCGTCTCGCC GGACAACGAG GTCTATTCCC TCCTGATGCA GTCGGACGGG 
AAGCTCGTCG TTGGCGGCAA CTTCTCCTCG ATCACGGCGA GCGGCGCCTC GACGGCCGCC 
GGGCGCAACG GCATCGCGCG GCTCAACGTG GATGGCACGC TCGACACCGG CTTCTATCCA 
AACCCGAACG GCCAGGTGCA GGTGATCCTC CCGGTGGCGG ACGGCAAGCT GCTGATCGCG 
GGCGGCTTCT CCGGACTGTA TCCGAACGGC ACGACCACGG TCGTGGATCG CAGCTTCGTG 
GCGCGGCTCA ACTCCGACGG CTCCGTTGAC ACCACCCTCG ACCTCGACGC GAACAGCTTC 
GTCAGCGCCG GCGTGCTTCA GCCCGATGGC AAGATCGTCC TCGGCGGGTA TTTCACCACC 
ATGGGTGGCA CGACGCGCAA CTATGTCGCG CGGCTCAAGG CGGACCAGAC GCTGGACGAC 
ACCTTCAATC CCAACCCGAA TGGCATCGTC AGCACGGTTG CGCTCCAACC GGCGGACAAC 
AAGATCGTCC TCGGCGGCAC CTTCACCGCG CTCCAGCCCG GCGGCACGAC CTACAACGCC 
TCGCTCGCGA CGCCGCGCAA CCGGCTCGCG CGGCTCAACA GCGACGGCAC GGTGGACCCG 
CTGTTCAATC CGAACGTCGA CGGGCAGGTC ACCGCGCTTG CGGTTTACAC CGATGGCTCG 
CTCATCGCGA CCGGTGCGCT CACGAACGTG CAGCCCTCGG GCTCGCTGAT GGTCGGCGGC 
GCGTTCACCC AGATCAACGG CACGCCGGCG AACAACTTCG CCAACATGAG CAGCGATGGC 
TCGATCAGCA CGGCGTTCCT GCCGAATCCA AACGGCGCGG TCAACGCCCT GCTCACGATC 
GCGGACGGTC GCACGGTCGT CGCTGGCGCG TTCACCCAGA TCGCCGGCGC GACGCGCAAC 
CGGGTCGCGC GCTTCAACAC TGACGACTCG CTCGACGCGA ACTTCAATCC GAACGTCAAC 
GGCGAGGTGC TCGCGCTCGC GCTCGAGCCC GACGGCGACC TGCTCATCGG CGGCGATTTC 
ACGCAAGTCG GCGGAGTTGC GCGCAACAAG CTCGCGCGCG TCAAGGCCGA CGGCAGCCTC 
GATGCTTCGT TTGCCCCGAC AGTGCCCGGC GCGGTCAGCG GTCTCGCGGT CGACGCGAGC 
GGCCGCATCG TGGTCCTCGC GGCTGGCAGC GGCGTGCGCA GCGTACTTTT GCGGCTCACC 
GCGGATGGCG CCGCAGATCC GAGCTTCACG ACCGTCAGCA GCGCGACCGC CATCAACTCG 
TTCGCTTTGC AGACCGACGG CCGGATCGTG GTCGGCGGCG CCTTCACCAG CATCGCCGGT 
GAGACGCGCA ACTACGTCGC CCGCTTGAAC GCGAACGGCA CGATCGATCC CACGCTGACC 
TCGAACCCGA ACGGGGAGGT GACCGCCGTG CTGCTCCAGC GCGACGGCAA GGTGGTGATC 
GGTGGACGGT TCAACCAAGT CGACGGCTTG GCGCGCGCCG GTCTCGCGCG CATCGCCACG 
ACTTCGTCGA ACACGGGCGC CGTGGCCTTC ACGACGAATG CCGCGCGCAA CGCCGTTACC 
TGGGTGCGCT CGGGCGTGGC GCCGGAAATT TCCAGCGCGT ATCTCGAAAC GTCGGCGGAC 
CTCGCCACTT GGACGACGCT CGGCCAGGCC ACCCGCGTGC CGAACTCGAC CAACTGGCAG 
GTGACCGGCG TCACGCTGCC GACTGATCCA ACCACTCCGG TTTACGTTCG CGCCAGCGCG 
ATCGTCGGTT CCAACCCGCA AAGCTCGACG GGCTTGATCG AGGCGCAGGG GCGCCTGAGC 
GCGGCCCTGC CGAGCATCAC CAGCGCGGGC GTGGTCGCGG CAGCGGCGGG ATCGAATTTC 
CTCTACGCGG TCACGGCGAC GGAAAGTCCG ACCACCTATG TGGCCAGCGG ACTGCCACCG 
GGGCTTGCCA TCAATTCCGC CACCGGCCTG ATCACGGGCA CGCCGACGCA AACCGGCACT 
TACAATGTCG TGGTGGGTGC GACCAACGCC GCGGGCACCG GCACCGCCAC GATCACGGTG 
GTCGTAGCCG ACGGTACGAC CCAAACGAGC CGCGTGACCA ATCTCTCCGT CAACACGCGA 
ATCGTCGCGT CGAATACAGT GGTCATCACC GGCTTCGTGA TTTCCGGCAC CGGGGCGCAG 
ACGGTGGTGT TGCGCGCGGT CGGCCCGGGT CTGACCTCGC TGGGCGTGAA CGGCGTGCTC 
GCCACGCCGC AGCTGCAGCT CTTCAACTCG AATGGCCAAA CGCTGCTGAC CAACGGTCGG 
TGGGGCGGCG CCAGCCAACT CACGACGGAG TTCGCGCGGC TTGGCGCTTA CCCGCTCAAC 
GCCGACAGCG AGGACGCGGC CGTGATCGTC ACGCTTACGC CCGGCGTCTA CACGATGCAC 
GTGGGCGGAG AGAACGGGGC CACCGGCACC GTGCTCGCGG AGGTCTATGA CGCCTCGGCC 
ACGCCGCCGC CCGCGAACCA GCCGAAGCTG GTGAACATTT CCGCGCGCGG CGTCGCTTTG 
GCCGGGCAAC CCATCACGGG TGGCTTTGTC ATCGCCGGCC AGACCAGCCG GCAGGTGCTG 
ATCCGCGGCG TCGGCCCGGG CCTCACGGCG CAGCAGGTGC CCGACGTGCT CGCGAATCCG 
AAGCTCACGC TCTATCGAAT CCAATCCGGC AACGCGACGG TCATCGCCCG CAACGACGAC 
TGGCAGACGC CCGAAACGGC CGTGCAGGAT TATCCGGGTT CGACCGGCGC GGCCATCTCC 
GCAGCCGCGA CGACCACCGG TGCGTTTGCG CTGAACTCCG GCAGCAAGGA CGCGGCGATC 
CTCGTCACGC TGCCGCCGGG CGTCTACACC GCCGAGGTTA ACGGCGCGGA TGGCGGCATC 
GGCGCCGCCA TCGTGGAAGT CTACGAGCTG CCGTAA 

 

Protein sequence

MPIASVFRPV LLVLALCGAA LFPPAVLGQV MGSTAADGFN PNVDGTVYAV VIQPDGKVLV 
AGNFTAIQPT GSSRPIPHAN IVRLLPDGRE DGTFNVNVNG QVSALILQPN GQIVIGGKFT 
SVAGVTRRRV ARLNADGSLD ATFDPNIEPR TADEGGSLTP EVTSLLLQSD GKLVVGGGFK 
AVQPNGAATF TLRNRLARFN SDGTLDAGFD PNANNMVLSL ALEPDGQILV GGGFTTLQPN 
GAAATTARKR IARLNVDGTV DPTFDPQANN AVSAIQVLPG GNILIGGTFT GLTPNGVTLD 
ASAGAMTRLA RLNADGTLVT SFSGFADGPV SVITLQPDGA ILVGGSFTAV GNGSSSYVGR 
LLPNGVLDTT FLPGPNYAVY AIAVQSNGSV LLGGAFLTLR GQGRTSVVRN HLARVSFRGA 
LDTDFRPDVN GRVRSLIKLS NGQWLVGGTF TSIAGQTRNG VVLLNADGSI DPRFKADING 
PVISAVQVSA TQIIVGGSFT RINTVARPYL AKLNLADGSV DEAYSPAPNN QVNAMVLQGD 
GKLVIGGAFT TLSPFSTTEP VSRNCLARLN ADGSVDLAFK AQANDAIVAM AAASDGQILI 
GGPFSTVVGS ADTRATTRYG LARLNADGAL DTGFNPNVNG TVAAIVVQSD NKIVFGGAFA 
VLAPNSDTTA TTRNNLARVE ADGSVDKTYD PNLNGQVSTL ALQADGKVVA GGRFSALKPN 
GIADGYERNY VARINTDGTL DQDFNLYLDT TIGNEVMGLA IAADNKIVVA GTFAQAGVNA 
VPRSRVLRAE ANGAIDTSFS ADLSTIGGAD IRAITQQFGG AVIVAGNFAG FGGTSGANLA 
RFYADSTPDT SFVPSFNGPV YAMAESPAKG LPVATQRSGF AWFETNGALR SGFHFSSEVT 
SISSIRAVTV DSNGKILIAA TFDLGGNSRS LVRFNPDGTI DSTFTPVTTT GTASSGTSTG 
TIYVIRPLAD GKILIGGSFS AINTTSRNFL ARLNADGQLD TSFVVSPDNE VYSLLMQSDG 
KLVVGGNFSS ITASGASTAA GRNGIARLNV DGTLDTGFYP NPNGQVQVIL PVADGKLLIA 
GGFSGLYPNG TTTVVDRSFV ARLNSDGSVD TTLDLDANSF VSAGVLQPDG KIVLGGYFTT 
MGGTTRNYVA RLKADQTLDD TFNPNPNGIV STVALQPADN KIVLGGTFTA LQPGGTTYNA 
SLATPRNRLA RLNSDGTVDP LFNPNVDGQV TALAVYTDGS LIATGALTNV QPSGSLMVGG 
AFTQINGTPA NNFANMSSDG SISTAFLPNP NGAVNALLTI ADGRTVVAGA FTQIAGATRN 
RVARFNTDDS LDANFNPNVN GEVLALALEP DGDLLIGGDF TQVGGVARNK LARVKADGSL 
DASFAPTVPG AVSGLAVDAS GRIVVLAAGS GVRSVLLRLT ADGAADPSFT TVSSATAINS 
FALQTDGRIV VGGAFTSIAG ETRNYVARLN ANGTIDPTLT SNPNGEVTAV LLQRDGKVVI 
GGRFNQVDGL ARAGLARIAT TSSNTGAVAF TTNAARNAVT WVRSGVAPEI SSAYLETSAD 
LATWTTLGQA TRVPNSTNWQ VTGVTLPTDP TTPVYVRASA IVGSNPQSST GLIEAQGRLS 
AALPSITSAG VVAAAAGSNF LYAVTATESP TTYVASGLPP GLAINSATGL ITGTPTQTGT 
YNVVVGATNA AGTGTATITV VVADGTTQTS RVTNLSVNTR IVASNTVVIT GFVISGTGAQ 
TVVLRAVGPG LTSLGVNGVL ATPQLQLFNS NGQTLLTNGR WGGASQLTTE FARLGAYPLN 
ADSEDAAVIV TLTPGVYTMH VGGENGATGT VLAEVYDASA TPPPANQPKL VNISARGVAL 
AGQPITGGFV IAGQTSRQVL IRGVGPGLTA QQVPDVLANP KLTLYRIQSG NATVIARNDD 
WQTPETAVQD YPGSTGAAIS AAATTTGAFA LNSGSKDAAI LVTLPPGVYT AEVNGADGGI 
GAAIVEVYEL P