Gene Oter_1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1136 
Symbol 
ID6205819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1415919 
End bp1421609 
Gene Length5691 bp 
Protein Length1896 aa 
Translation table11 
GC content66% 
IMG OID641690779 
ProductGAF sensor hybrid histidine kinase 
Protein accessionYP_001818024 
Protein GI182412958 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.270239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.51439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCA AACTGCCGAC CAACGGCGCG CGATCCCACG AACTGGCGCA AGACGAATTC 
ATGAGGCAAT TGATTGGGGT GCTCGCCGCG GTGCGCGACG GCGATTTCTC CGCGCGGCTG
CCGTCGGATT GGACCGGGCT CGAGGGCAAG GTCGCCGAGC ACATCAACGG GATCACGATG
CGCACGCAGC GGTTCAACAG CTCGTTGCTG CGGCTGCAGC GTCAGGTCGG CGAAGAGGGA
AAGATCAGCG AGCGGATGCC GCTCGGTGAC TCGTGCGGCG GTTGGGCCGA GCGGATCGAG
GCGATCAACG CGCTGCTCGA CCAGCTCTCG CAACCCACCG TCGAGGTCGG CCGCGTGATC
GGCGCGGTGG CGAAGGGCGA TCTTTCGCAG GCGATGCCAC TCGAGCTCAA CGGCCGCTAC
CTCAAGGGCG AATACCTCCG CACCGCGAAA CTGGTGAACG GCATGGTCGG CCAGCTCGAG
GCGTTCTCCG TCGAGGTGAT CCGCGTCGCC CGCGAGGTCG GCACCGAGGG CAAGCTCGGC
GGCCAGGCCC AGGTCAAGGG CGTGTCCGGC GTGTGGAAGG AGTTGACCGA GTCAGTCAAC
CAAATGGCCG GCAACCTGAC CGCGCAGGTC CGCAACATCG CCGAGGTCAC CATCGCCGTC
GCGAACGGCG ACCTTTCCAA GAAGATCACG GTCGATGTCC GCGGCGAAAT TCTGCAGCTA
AAGGAAGCGA TCAACGTCAT GGTCGACCAG CTGCGGTCGT TCGCGGCGGA GGTGACGCGC
GTGGCACGCG AGGTCGGCAC CGAAGGCAAG CTCGGCGGCC AGGCCGTCGT CCCCGGCGTC
GCCGGCACGT GGAAGGACCT CACCGACTCC GTCAACGCGA TGGCGTCCAA CCTCACGGCG
CAAGTCCGCA ACATCGCCGG CGTGACGACG GCCGTGGCGC GCGGTGACTT GTCGCGCAAG
ATCACCGTCG ACGTCAAAGG CGAGATTCTC GAGCTGAAAG AAACCATCAA CACGATGGTC
GACCGGCTCA ACGCCTTCGC GTCGGAGGTG AGCCGCGTCG CGCGCGAAGT CGGCACCGAG
GGCAAGCTCG GCGGCCAGGC GCAGGTGCCC GGCGTCGCCG GTACGTGGAA GGATCTCACC
GACAACGTCA ACTCGATGGC GAACAACCTG ACGACGCAGG TGCGCAACAT CGCGGACGTC
ACCACCGCCG TCGCGAAGGG CGACCTGGGA CGCAAGATCA CCGTCGATGT TCGCGGCGAA
ATTCTGGAGC TGAAGAACAC CATCAACACG ATGGTCGACC AGCTCAACGG CTTCGCCGCC
GAGGTGACGC GCGTTGCCCG CGAAGTCGGC ACCGAAGGCG CGCTCGGCGG CCAGGCGGTC
GTGCCCGGCG TCGGCGGCAC GTGGAAGGAC TTGACCGACT CGGTGAACGC GATGGCGACC
AATCTCACCG GTCAGGTCCG CAACATCGCC GACGTGACCA CCGCCGTCGC GCGGGGCGAT
CTTTCCCGGA AAATCACGGT CGACGTCAAA GGCGAGATTC TCGAGCTGAA GAACACCATC
AACACGATGG TCGACCAGCT CAACGGCTTC GCCTCCGAGG TGAGCCGCGT GGCGCGCGAG
GTCGGCACCG AGGGCAAGCT CGGCGGCCAG GCACAGGTGC AGGGCGTCGC TGGCACTTGG
AAGGACCTCA CGGACAACGT GAATTCGATG GCGTCGAATC TCACCGCGCA GGTCCGCAAC
ATCGCCGAGG TGACCACCGC CGTCGCGAAG GGCGACCTCT CGCGCAAGAT CACCGTCGAC
GTCAAAGGCG AGATTCTCGA GCTGAAGAAC ACCATCAATA CGATGGTCGA CCAGCTCAAC
GGCTTCGCTT CCGAAGTGAC GCGCGTCGCC CGCGAGGTCG GCACCGAGGG CAAGCTCGGC
GGCCAGGCAC AGGTGCCCGG TGTCGGCGGC ACGTGGAAGG AGCTCACCGA GTCTGTCAAC
CAGATGGCAG GCAATCTCAC GGCGCAGGTG CGCAACATCG CGGATGTCAC CACCGCCGTC
GCGCTCGGCG ACCTCTCGCG CAAGATCACC GTCGACGTCA AAGGCGAGAT CCTGCAGCTG
AAGGAAACCA TCAACACGAT GGTCGAGCAG TTGCGCTCGT TCGCGTCCGA GGTGACACGC
GTCGCCCGCG AGGTCGGCAC GGAAGGCCGG CTCGGCGTAC AGGCGGTCGT GCCCGGCGTC
GCCGGGACGT GGAAAGATCT TACTGACTCG GTCAACGCGA TGGGCGCCAA CCTCACCGCG
CAGGTCCGCA ACATCGCGGA GGTCACCACC GCCGTCGCAC GCGGCGACCT GTCGCGCAAG
ATCACGGTCG ACGTCAAAGG CGAGATTCTC GAGCTGAAGA ACACCATCAA TACGATGGTC
GACCAGCTCA ACGCGTTCGC CGCCGAGGTC ACGCGCGTCG CCCGCGAGGT CGGCACCGAG
GGCAAACTCG GCGGCCAGGC CGAGGTCCGC GGCGTCGCCG GCACGTGGAA GGATCTTACG
GACTCCGTCA ACGTCATGGC CGCCAACCTC ACCGACCAGG TGTCAGGCAT CGTGCGCGTC
GTGACGGCGG TCGCGAACGG CGACCTGCGC CAGAAGCTCA CCGTCGAGGC CAAGGGCGAA
GTCGCCGCGC TCGCCGAAAC GATCAACAAC ATGACCGACA CGCTCGCGAC GTTCGCCGAG
CAGGTCACGA ACGTTGCTCG CGAGGTCGGC GTCGAGGGCC GGCTCGGCGG CCAGGCGCAC
GTGCCCGGCG CGTCGGGCAC GTGGAAGGAC CTCACCGGCA ACGTCAACCT GCTCGCGGCC
AATCTCACCA CGCAGGTGCG CGCCATCGCC GAGGTCGCCA CCGCGGTGAC GAAGGGCGAC
CTCACGCGTT CGATTCAGGT CAGCGCCCGC GGCGAGGTCG CCGAGTTGAA GGACAACATC
AACACGATGA TCTACAATCT TCGTGTCACG ACCGAGTCCA ACCAGGAGCA GGACTGGCTG
AAGACGAACC TCGCGAAGTT CACCCGCATG CTGCAGGGCC AGCGTGATCT GCTCACGGTC
GGCAAGATGC TGCTCTCCGA GCTTGCGCCC CTCGTCGACG CGCAGCAGGG CACGATTTAC
CAGATGGAAT CGGGCGATGA GCGCCCGGTG CTGCGATTGC TCGCCGGCTA CGCGCACCGC
GCCGACCAGC CGGCCGAGAT CGCGTTGGGC GAGGGGCTCG TCGGTCAATG CGCAGTCGAG
AAGCAGCGGA TCCTGCTGAA CGATATTCCG CAAAGCTACA CCCGCGTGCA CTCCAGCCTC
GGCGAAGCGC CGCCCGTCAG CATCGTCGTG CTGCCGGTGT TGTTCGAAGG CCAGACCAAG
GCCGTCATCG AGCTCGCCTC GCTGCACGCG TTCAGCGTCA CGCACGTTTC CTTCCTCGAA
CAGCTCACGC AGTCGATCGG CGTCGTGCTC AACACCATCG AGGCCACGAT GCGCACCGAG
CGTCTGCTGC AACAGTCGCA GCAGCTCACC GTCGAACTGC AGAGCCAGCA GAAGGAGCTC
ACGCAGACCA ACGAGGAGCT CGCGCAGAAG GCCCGGCAGC TCGCCGAGCA GAACGTCGAG
GTCGAACGCA AGAACACCGA GGTCGAGCAG GCGCGCCGCG CGCTCGAGGA AAAGGCCGCC
GAGCTCGCAC TCACCTCGAA ATACAAGTCC GAGTTCCTCG CCAACATGTC GCACGAGCTG
CGCACGCCGC TGAACTCCAT CCTGATCCTC GGCCAGCAGC TCGCGGAAAA CGCCACCGGC
AATCTCACGA CGAAGCAGAT CGATTTCGCC CGCAACATCC ACTCGTCGGG CACCGACCTG
CTCAACCTCA TCACCGACAT CCTCGATCTC TCGAAGATCG AGTCGGGCAC CGTCACGGTC
GAGGCGGAGG AGATCAGCTT CAGCTCGTTG CGCGATGCGA TCGAGCGCAA CTTCCGGCAC
ATCGCCGAGG CGAAGAACGT CCCGCTCGAG GTCGACTTCG CCTCCACGCT GCCCCGCGCG
ATCACCACCG ACCCAAAACG GCTGCAGCAG ATTCTGAAGA ATCTGCTCTC GAACGCGTTC
AAGTTCACCG CGCAGGGCAA GGTGGCCGTG CGCGTGTTTC CGGCTCTCAG CGGCTGGGTG
CAGGGCCATC CGGTGCTCAG CCGTGCCACG CATGTGATCG CCTTCGCGAT CCAGGATACC
GGTATCGGCA TCGCGCCGGA AAAACAGAAA CTGATCTTCG AGGCGTTCCA GCAGGCGGAC
GCCGGCACGA GCCGCAAATA CGGCGGCACC GGCCTCGGCC TCTCGATCTC GCGCGAGCTG
GCCACGCTGC TCGGCGGCGA GATCCGACTC AACAGCACGC CCCGCGAGGG CAGCACGTTC
ACGTTGTATC TGCCGCTGTT CTACCTCGAG CCCGCGCGCG AACCGTCTCG CGGCGGCCCG
GCCAGCGCCT CGCCCGTCAT GCTGCCCGTC GCCCGCGAGG AAGTGATCCT CGACGATCGC
GACCAGATCC AGCCCGGCGA CCACACGCTG CTCATCGTCG AGGACGACCC GCACTACGCC
CGCGTGCTCC TCGGCCTGGC CCGTGAGCGA GGTTTCAAGG GCATCGTCGC CACCCGCGGC
GCCGCGGCGC TCGCGCTCGC ACGCCAGCAC CAGCCCACCG CCATCACCCT CGATGTGCTG
CTGCCCGACA TGCTCGGTTG GACCGTCCTC AACAACCTCA AGCTCGATCC CGCCACCCGG
CACATCCCGG TGCAGATCAT CTCGGTCGAA GAGGAGCGCT CGCATGCGCT GGCCCACGGC
GCCTTCGCCT ACACGGTGAA ACCCACCACC ACGGAGGGCC TGCAGCAGTG CTTCGACCGG
ATCAAGCGCT ACGTCGAGCC GCACGTGAAA CGGCTGCTCA TCGTCGAGGA CAACGCGATC
GAACGCGACA GCATCGTGCA GCTGCTGGCT CACGACGACA TCGAGATCGT CACCGCCGGC
ACCGGCGCCG AGGCGCTCGA ACAGCTGCTC GACCGGCCGG TGGATTGCTG CGTGCTCGAC
CTGCGGCTGC CCGACATGAG CGGGTTCGAA CTGCTCGACC GCGTGCAGCG TGAGCCGGCG
CTCCGGGAGG TGCCCGTCGT CGTCTTCACC GGCAAGGATC TCTCGACCGA GGAGGAGCAC
CGACTCAAGA CGGTGGCCAA GAGCGTCCTC GTGAAGGACG TGCAGTCGCC CGAGCGGCTG
TTCGACGAAA CCGCGCTCTT CCTCCACCGC GTCGTCGCCG ACCTGCCCGA AGCGAAACGC
CAGCTGCTCA CGCACCTGCA CACCTCCAAC GCGGTGCTGC GCGACCGCAA GATCCTCGTC
GTCGACGACG ACGCCCGCAA CATCTTCGCG CTGACGACCA TGCTCGAGAA CTACGAGATG
GAGGTCATCA GCGCGATGAA CGGCCGGCAG GCGATCGAGT TGCTCCAGTC CCACGGTGAA
ATCGGCGCCG TGCTCATGGA CATCATGATG CCCGAAATGG ACGGCTACGA AACGATGCGC
GAGATCCGGA AGGACCCGCG CTTCAGTACG CTGCCGATCC TCGCGCTCAC CGCCAAGGCG
ATGAAAGGCG ACCGCGACAA ATGCCTCGCC GCCGGCGCGT CGGACTACAT CGCGAAGCCG
GTCAACACCA ACGAGCTCCT CTCGCTCCTC CGCGTATGGC TGTACCGGTG A
 
Protein sequence
MKTKLPTNGA RSHELAQDEF MRQLIGVLAA VRDGDFSARL PSDWTGLEGK VAEHINGITM 
RTQRFNSSLL RLQRQVGEEG KISERMPLGD SCGGWAERIE AINALLDQLS QPTVEVGRVI
GAVAKGDLSQ AMPLELNGRY LKGEYLRTAK LVNGMVGQLE AFSVEVIRVA REVGTEGKLG
GQAQVKGVSG VWKELTESVN QMAGNLTAQV RNIAEVTIAV ANGDLSKKIT VDVRGEILQL
KEAINVMVDQ LRSFAAEVTR VAREVGTEGK LGGQAVVPGV AGTWKDLTDS VNAMASNLTA
QVRNIAGVTT AVARGDLSRK ITVDVKGEIL ELKETINTMV DRLNAFASEV SRVAREVGTE
GKLGGQAQVP GVAGTWKDLT DNVNSMANNL TTQVRNIADV TTAVAKGDLG RKITVDVRGE
ILELKNTINT MVDQLNGFAA EVTRVAREVG TEGALGGQAV VPGVGGTWKD LTDSVNAMAT
NLTGQVRNIA DVTTAVARGD LSRKITVDVK GEILELKNTI NTMVDQLNGF ASEVSRVARE
VGTEGKLGGQ AQVQGVAGTW KDLTDNVNSM ASNLTAQVRN IAEVTTAVAK GDLSRKITVD
VKGEILELKN TINTMVDQLN GFASEVTRVA REVGTEGKLG GQAQVPGVGG TWKELTESVN
QMAGNLTAQV RNIADVTTAV ALGDLSRKIT VDVKGEILQL KETINTMVEQ LRSFASEVTR
VAREVGTEGR LGVQAVVPGV AGTWKDLTDS VNAMGANLTA QVRNIAEVTT AVARGDLSRK
ITVDVKGEIL ELKNTINTMV DQLNAFAAEV TRVAREVGTE GKLGGQAEVR GVAGTWKDLT
DSVNVMAANL TDQVSGIVRV VTAVANGDLR QKLTVEAKGE VAALAETINN MTDTLATFAE
QVTNVAREVG VEGRLGGQAH VPGASGTWKD LTGNVNLLAA NLTTQVRAIA EVATAVTKGD
LTRSIQVSAR GEVAELKDNI NTMIYNLRVT TESNQEQDWL KTNLAKFTRM LQGQRDLLTV
GKMLLSELAP LVDAQQGTIY QMESGDERPV LRLLAGYAHR ADQPAEIALG EGLVGQCAVE
KQRILLNDIP QSYTRVHSSL GEAPPVSIVV LPVLFEGQTK AVIELASLHA FSVTHVSFLE
QLTQSIGVVL NTIEATMRTE RLLQQSQQLT VELQSQQKEL TQTNEELAQK ARQLAEQNVE
VERKNTEVEQ ARRALEEKAA ELALTSKYKS EFLANMSHEL RTPLNSILIL GQQLAENATG
NLTTKQIDFA RNIHSSGTDL LNLITDILDL SKIESGTVTV EAEEISFSSL RDAIERNFRH
IAEAKNVPLE VDFASTLPRA ITTDPKRLQQ ILKNLLSNAF KFTAQGKVAV RVFPALSGWV
QGHPVLSRAT HVIAFAIQDT GIGIAPEKQK LIFEAFQQAD AGTSRKYGGT GLGLSISREL
ATLLGGEIRL NSTPREGSTF TLYLPLFYLE PAREPSRGGP ASASPVMLPV AREEVILDDR
DQIQPGDHTL LIVEDDPHYA RVLLGLARER GFKGIVATRG AAALALARQH QPTAITLDVL
LPDMLGWTVL NNLKLDPATR HIPVQIISVE EERSHALAHG AFAYTVKPTT TEGLQQCFDR
IKRYVEPHVK RLLIVEDNAI ERDSIVQLLA HDDIEIVTAG TGAEALEQLL DRPVDCCVLD
LRLPDMSGFE LLDRVQREPA LREVPVVVFT GKDLSTEEEH RLKTVAKSVL VKDVQSPERL
FDETALFLHR VVADLPEAKR QLLTHLHTSN AVLRDRKILV VDDDARNIFA LTTMLENYEM
EVISAMNGRQ AIELLQSHGE IGAVLMDIMM PEMDGYETMR EIRKDPRFST LPILALTAKA
MKGDRDKCLA AGASDYIAKP VNTNELLSLL RVWLYR