Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1136 |
Symbol | |
ID | 6205819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1415919 |
End bp | 1421609 |
Gene Length | 5691 bp |
Protein Length | 1896 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641690779 |
Product | GAF sensor hybrid histidine kinase |
Protein accession | YP_001818024 |
Protein GI | 182412958 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.270239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.51439 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACCA AACTGCCGAC CAACGGCGCG CGATCCCACG AACTGGCGCA AGACGAATTC ATGAGGCAAT TGATTGGGGT GCTCGCCGCG GTGCGCGACG GCGATTTCTC CGCGCGGCTG CCGTCGGATT GGACCGGGCT CGAGGGCAAG GTCGCCGAGC ACATCAACGG GATCACGATG CGCACGCAGC GGTTCAACAG CTCGTTGCTG CGGCTGCAGC GTCAGGTCGG CGAAGAGGGA AAGATCAGCG AGCGGATGCC GCTCGGTGAC TCGTGCGGCG GTTGGGCCGA GCGGATCGAG GCGATCAACG CGCTGCTCGA CCAGCTCTCG CAACCCACCG TCGAGGTCGG CCGCGTGATC GGCGCGGTGG CGAAGGGCGA TCTTTCGCAG GCGATGCCAC TCGAGCTCAA CGGCCGCTAC CTCAAGGGCG AATACCTCCG CACCGCGAAA CTGGTGAACG GCATGGTCGG CCAGCTCGAG GCGTTCTCCG TCGAGGTGAT CCGCGTCGCC CGCGAGGTCG GCACCGAGGG CAAGCTCGGC GGCCAGGCCC AGGTCAAGGG CGTGTCCGGC GTGTGGAAGG AGTTGACCGA GTCAGTCAAC CAAATGGCCG GCAACCTGAC CGCGCAGGTC CGCAACATCG CCGAGGTCAC CATCGCCGTC GCGAACGGCG ACCTTTCCAA GAAGATCACG GTCGATGTCC GCGGCGAAAT TCTGCAGCTA AAGGAAGCGA TCAACGTCAT GGTCGACCAG CTGCGGTCGT TCGCGGCGGA GGTGACGCGC GTGGCACGCG AGGTCGGCAC CGAAGGCAAG CTCGGCGGCC AGGCCGTCGT CCCCGGCGTC GCCGGCACGT GGAAGGACCT CACCGACTCC GTCAACGCGA TGGCGTCCAA CCTCACGGCG CAAGTCCGCA ACATCGCCGG CGTGACGACG GCCGTGGCGC GCGGTGACTT GTCGCGCAAG ATCACCGTCG ACGTCAAAGG CGAGATTCTC GAGCTGAAAG AAACCATCAA CACGATGGTC GACCGGCTCA ACGCCTTCGC GTCGGAGGTG AGCCGCGTCG CGCGCGAAGT CGGCACCGAG GGCAAGCTCG GCGGCCAGGC GCAGGTGCCC GGCGTCGCCG GTACGTGGAA GGATCTCACC GACAACGTCA ACTCGATGGC GAACAACCTG ACGACGCAGG TGCGCAACAT CGCGGACGTC ACCACCGCCG TCGCGAAGGG CGACCTGGGA CGCAAGATCA CCGTCGATGT TCGCGGCGAA ATTCTGGAGC TGAAGAACAC CATCAACACG ATGGTCGACC AGCTCAACGG CTTCGCCGCC GAGGTGACGC GCGTTGCCCG CGAAGTCGGC ACCGAAGGCG CGCTCGGCGG CCAGGCGGTC GTGCCCGGCG TCGGCGGCAC GTGGAAGGAC TTGACCGACT CGGTGAACGC GATGGCGACC AATCTCACCG GTCAGGTCCG CAACATCGCC GACGTGACCA CCGCCGTCGC GCGGGGCGAT CTTTCCCGGA AAATCACGGT CGACGTCAAA GGCGAGATTC TCGAGCTGAA GAACACCATC AACACGATGG TCGACCAGCT CAACGGCTTC GCCTCCGAGG TGAGCCGCGT GGCGCGCGAG GTCGGCACCG AGGGCAAGCT CGGCGGCCAG GCACAGGTGC AGGGCGTCGC TGGCACTTGG AAGGACCTCA CGGACAACGT GAATTCGATG GCGTCGAATC TCACCGCGCA GGTCCGCAAC ATCGCCGAGG TGACCACCGC CGTCGCGAAG GGCGACCTCT CGCGCAAGAT CACCGTCGAC GTCAAAGGCG AGATTCTCGA GCTGAAGAAC ACCATCAATA CGATGGTCGA CCAGCTCAAC GGCTTCGCTT CCGAAGTGAC GCGCGTCGCC CGCGAGGTCG GCACCGAGGG CAAGCTCGGC GGCCAGGCAC AGGTGCCCGG TGTCGGCGGC ACGTGGAAGG AGCTCACCGA GTCTGTCAAC CAGATGGCAG GCAATCTCAC GGCGCAGGTG CGCAACATCG CGGATGTCAC CACCGCCGTC GCGCTCGGCG ACCTCTCGCG CAAGATCACC GTCGACGTCA AAGGCGAGAT CCTGCAGCTG AAGGAAACCA TCAACACGAT GGTCGAGCAG TTGCGCTCGT TCGCGTCCGA GGTGACACGC GTCGCCCGCG AGGTCGGCAC GGAAGGCCGG CTCGGCGTAC AGGCGGTCGT GCCCGGCGTC GCCGGGACGT GGAAAGATCT TACTGACTCG GTCAACGCGA TGGGCGCCAA CCTCACCGCG CAGGTCCGCA ACATCGCGGA GGTCACCACC GCCGTCGCAC GCGGCGACCT GTCGCGCAAG ATCACGGTCG ACGTCAAAGG CGAGATTCTC GAGCTGAAGA ACACCATCAA TACGATGGTC GACCAGCTCA ACGCGTTCGC CGCCGAGGTC ACGCGCGTCG CCCGCGAGGT CGGCACCGAG GGCAAACTCG GCGGCCAGGC CGAGGTCCGC GGCGTCGCCG GCACGTGGAA GGATCTTACG GACTCCGTCA ACGTCATGGC CGCCAACCTC ACCGACCAGG TGTCAGGCAT CGTGCGCGTC GTGACGGCGG TCGCGAACGG CGACCTGCGC CAGAAGCTCA CCGTCGAGGC CAAGGGCGAA GTCGCCGCGC TCGCCGAAAC GATCAACAAC ATGACCGACA CGCTCGCGAC GTTCGCCGAG CAGGTCACGA ACGTTGCTCG CGAGGTCGGC GTCGAGGGCC GGCTCGGCGG CCAGGCGCAC GTGCCCGGCG CGTCGGGCAC GTGGAAGGAC CTCACCGGCA ACGTCAACCT GCTCGCGGCC AATCTCACCA CGCAGGTGCG CGCCATCGCC GAGGTCGCCA CCGCGGTGAC GAAGGGCGAC CTCACGCGTT CGATTCAGGT CAGCGCCCGC GGCGAGGTCG CCGAGTTGAA GGACAACATC AACACGATGA TCTACAATCT TCGTGTCACG ACCGAGTCCA ACCAGGAGCA GGACTGGCTG AAGACGAACC TCGCGAAGTT CACCCGCATG CTGCAGGGCC AGCGTGATCT GCTCACGGTC GGCAAGATGC TGCTCTCCGA GCTTGCGCCC CTCGTCGACG CGCAGCAGGG CACGATTTAC CAGATGGAAT CGGGCGATGA GCGCCCGGTG CTGCGATTGC TCGCCGGCTA CGCGCACCGC GCCGACCAGC CGGCCGAGAT CGCGTTGGGC GAGGGGCTCG TCGGTCAATG CGCAGTCGAG AAGCAGCGGA TCCTGCTGAA CGATATTCCG CAAAGCTACA CCCGCGTGCA CTCCAGCCTC GGCGAAGCGC CGCCCGTCAG CATCGTCGTG CTGCCGGTGT TGTTCGAAGG CCAGACCAAG GCCGTCATCG AGCTCGCCTC GCTGCACGCG TTCAGCGTCA CGCACGTTTC CTTCCTCGAA CAGCTCACGC AGTCGATCGG CGTCGTGCTC AACACCATCG AGGCCACGAT GCGCACCGAG CGTCTGCTGC AACAGTCGCA GCAGCTCACC GTCGAACTGC AGAGCCAGCA GAAGGAGCTC ACGCAGACCA ACGAGGAGCT CGCGCAGAAG GCCCGGCAGC TCGCCGAGCA GAACGTCGAG GTCGAACGCA AGAACACCGA GGTCGAGCAG GCGCGCCGCG CGCTCGAGGA AAAGGCCGCC GAGCTCGCAC TCACCTCGAA ATACAAGTCC GAGTTCCTCG CCAACATGTC GCACGAGCTG CGCACGCCGC TGAACTCCAT CCTGATCCTC GGCCAGCAGC TCGCGGAAAA CGCCACCGGC AATCTCACGA CGAAGCAGAT CGATTTCGCC CGCAACATCC ACTCGTCGGG CACCGACCTG CTCAACCTCA TCACCGACAT CCTCGATCTC TCGAAGATCG AGTCGGGCAC CGTCACGGTC GAGGCGGAGG AGATCAGCTT CAGCTCGTTG CGCGATGCGA TCGAGCGCAA CTTCCGGCAC ATCGCCGAGG CGAAGAACGT CCCGCTCGAG GTCGACTTCG CCTCCACGCT GCCCCGCGCG ATCACCACCG ACCCAAAACG GCTGCAGCAG ATTCTGAAGA ATCTGCTCTC GAACGCGTTC AAGTTCACCG CGCAGGGCAA GGTGGCCGTG CGCGTGTTTC CGGCTCTCAG CGGCTGGGTG CAGGGCCATC CGGTGCTCAG CCGTGCCACG CATGTGATCG CCTTCGCGAT CCAGGATACC GGTATCGGCA TCGCGCCGGA AAAACAGAAA CTGATCTTCG AGGCGTTCCA GCAGGCGGAC GCCGGCACGA GCCGCAAATA CGGCGGCACC GGCCTCGGCC TCTCGATCTC GCGCGAGCTG GCCACGCTGC TCGGCGGCGA GATCCGACTC AACAGCACGC CCCGCGAGGG CAGCACGTTC ACGTTGTATC TGCCGCTGTT CTACCTCGAG CCCGCGCGCG AACCGTCTCG CGGCGGCCCG GCCAGCGCCT CGCCCGTCAT GCTGCCCGTC GCCCGCGAGG AAGTGATCCT CGACGATCGC GACCAGATCC AGCCCGGCGA CCACACGCTG CTCATCGTCG AGGACGACCC GCACTACGCC CGCGTGCTCC TCGGCCTGGC CCGTGAGCGA GGTTTCAAGG GCATCGTCGC CACCCGCGGC GCCGCGGCGC TCGCGCTCGC ACGCCAGCAC CAGCCCACCG CCATCACCCT CGATGTGCTG CTGCCCGACA TGCTCGGTTG GACCGTCCTC AACAACCTCA AGCTCGATCC CGCCACCCGG CACATCCCGG TGCAGATCAT CTCGGTCGAA GAGGAGCGCT CGCATGCGCT GGCCCACGGC GCCTTCGCCT ACACGGTGAA ACCCACCACC ACGGAGGGCC TGCAGCAGTG CTTCGACCGG ATCAAGCGCT ACGTCGAGCC GCACGTGAAA CGGCTGCTCA TCGTCGAGGA CAACGCGATC GAACGCGACA GCATCGTGCA GCTGCTGGCT CACGACGACA TCGAGATCGT CACCGCCGGC ACCGGCGCCG AGGCGCTCGA ACAGCTGCTC GACCGGCCGG TGGATTGCTG CGTGCTCGAC CTGCGGCTGC CCGACATGAG CGGGTTCGAA CTGCTCGACC GCGTGCAGCG TGAGCCGGCG CTCCGGGAGG TGCCCGTCGT CGTCTTCACC GGCAAGGATC TCTCGACCGA GGAGGAGCAC CGACTCAAGA CGGTGGCCAA GAGCGTCCTC GTGAAGGACG TGCAGTCGCC CGAGCGGCTG TTCGACGAAA CCGCGCTCTT CCTCCACCGC GTCGTCGCCG ACCTGCCCGA AGCGAAACGC CAGCTGCTCA CGCACCTGCA CACCTCCAAC GCGGTGCTGC GCGACCGCAA GATCCTCGTC GTCGACGACG ACGCCCGCAA CATCTTCGCG CTGACGACCA TGCTCGAGAA CTACGAGATG GAGGTCATCA GCGCGATGAA CGGCCGGCAG GCGATCGAGT TGCTCCAGTC CCACGGTGAA ATCGGCGCCG TGCTCATGGA CATCATGATG CCCGAAATGG ACGGCTACGA AACGATGCGC GAGATCCGGA AGGACCCGCG CTTCAGTACG CTGCCGATCC TCGCGCTCAC CGCCAAGGCG ATGAAAGGCG ACCGCGACAA ATGCCTCGCC GCCGGCGCGT CGGACTACAT CGCGAAGCCG GTCAACACCA ACGAGCTCCT CTCGCTCCTC CGCGTATGGC TGTACCGGTG A
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Protein sequence | MKTKLPTNGA RSHELAQDEF MRQLIGVLAA VRDGDFSARL PSDWTGLEGK VAEHINGITM RTQRFNSSLL RLQRQVGEEG KISERMPLGD SCGGWAERIE AINALLDQLS QPTVEVGRVI GAVAKGDLSQ AMPLELNGRY LKGEYLRTAK LVNGMVGQLE AFSVEVIRVA REVGTEGKLG GQAQVKGVSG VWKELTESVN QMAGNLTAQV RNIAEVTIAV ANGDLSKKIT VDVRGEILQL KEAINVMVDQ LRSFAAEVTR VAREVGTEGK LGGQAVVPGV AGTWKDLTDS VNAMASNLTA QVRNIAGVTT AVARGDLSRK ITVDVKGEIL ELKETINTMV DRLNAFASEV SRVAREVGTE GKLGGQAQVP GVAGTWKDLT DNVNSMANNL TTQVRNIADV TTAVAKGDLG RKITVDVRGE ILELKNTINT MVDQLNGFAA EVTRVAREVG TEGALGGQAV VPGVGGTWKD LTDSVNAMAT NLTGQVRNIA DVTTAVARGD LSRKITVDVK GEILELKNTI NTMVDQLNGF ASEVSRVARE VGTEGKLGGQ AQVQGVAGTW KDLTDNVNSM ASNLTAQVRN IAEVTTAVAK GDLSRKITVD VKGEILELKN TINTMVDQLN GFASEVTRVA REVGTEGKLG GQAQVPGVGG TWKELTESVN QMAGNLTAQV RNIADVTTAV ALGDLSRKIT VDVKGEILQL KETINTMVEQ LRSFASEVTR VAREVGTEGR LGVQAVVPGV AGTWKDLTDS VNAMGANLTA QVRNIAEVTT AVARGDLSRK ITVDVKGEIL ELKNTINTMV DQLNAFAAEV TRVAREVGTE GKLGGQAEVR GVAGTWKDLT DSVNVMAANL TDQVSGIVRV VTAVANGDLR QKLTVEAKGE VAALAETINN MTDTLATFAE QVTNVAREVG VEGRLGGQAH VPGASGTWKD LTGNVNLLAA NLTTQVRAIA EVATAVTKGD LTRSIQVSAR GEVAELKDNI NTMIYNLRVT TESNQEQDWL KTNLAKFTRM LQGQRDLLTV GKMLLSELAP LVDAQQGTIY QMESGDERPV LRLLAGYAHR ADQPAEIALG EGLVGQCAVE KQRILLNDIP QSYTRVHSSL GEAPPVSIVV LPVLFEGQTK AVIELASLHA FSVTHVSFLE QLTQSIGVVL NTIEATMRTE RLLQQSQQLT VELQSQQKEL TQTNEELAQK ARQLAEQNVE VERKNTEVEQ ARRALEEKAA ELALTSKYKS EFLANMSHEL RTPLNSILIL GQQLAENATG NLTTKQIDFA RNIHSSGTDL LNLITDILDL SKIESGTVTV EAEEISFSSL RDAIERNFRH IAEAKNVPLE VDFASTLPRA ITTDPKRLQQ ILKNLLSNAF KFTAQGKVAV RVFPALSGWV QGHPVLSRAT HVIAFAIQDT GIGIAPEKQK LIFEAFQQAD AGTSRKYGGT GLGLSISREL ATLLGGEIRL NSTPREGSTF TLYLPLFYLE PAREPSRGGP ASASPVMLPV AREEVILDDR DQIQPGDHTL LIVEDDPHYA RVLLGLARER GFKGIVATRG AAALALARQH QPTAITLDVL LPDMLGWTVL NNLKLDPATR HIPVQIISVE EERSHALAHG AFAYTVKPTT TEGLQQCFDR IKRYVEPHVK RLLIVEDNAI ERDSIVQLLA HDDIEIVTAG TGAEALEQLL DRPVDCCVLD LRLPDMSGFE LLDRVQREPA LREVPVVVFT GKDLSTEEEH RLKTVAKSVL VKDVQSPERL FDETALFLHR VVADLPEAKR QLLTHLHTSN AVLRDRKILV VDDDARNIFA LTTMLENYEM EVISAMNGRQ AIELLQSHGE IGAVLMDIMM PEMDGYETMR EIRKDPRFST LPILALTAKA MKGDRDKCLA AGASDYIAKP VNTNELLSLL RVWLYR
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