| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1124 |
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| Symbol | |
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| ID | 6205196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1397309 |
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| End bp | 1398535 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641690767 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001818012 |
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| Protein GI | 182412946 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.360909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTTT TTTCGCGTCC GCGTTTTCGC TGGTTCCTCT ACGTCGCCGT CGTGCTCCTG
ATGGGATTCG GCACGTGGTA TTTTGCGTTG CGCTCGAAAC CTGAGCGCCC GCGTTACCCA
CAACCCGAGT GGGCCGGCAA CACCTGGCCC CCGCTGATCC CGGTCCGCAC CGTCACCGCC
GAAAAACGCG ATCTCCCGGT GCACTTGAAG GCGATCGGCA CGGTGACACC GCTCAACACC
GTGACGGTGA AGGCGCGGGT CCCCGGTCAG CTGCTGCGCA TCGCGTTCGA GGAAGGCCAG
CGCGTCGAAC GCGGCCAGGT GCTCGCCGAG ATCGATCCGG CGCCTTACCG CATCGTGCTC
GCCCAGGCCG AAGGCCGGCT GCAACAGGCG ATGGCCCAGC TCGAAAGCGC CCGCAGCGAT
TTCGAACGGA CCACCAACCT GCACCGACAA AACCTGGTCA CCGACCAACA GCTGCAACTG
CAGGACGCCC TCGTGGCCGA ACGCGCCGGC GCCGTCGCCA CCGCGCAGGC GCAGGTCGAG
GATGCGCGGC TCCAGCTCAG CTACACGCGC GTCGAGGCGC CCATCGCCGG CCGCGCCGGT
CTCCGCCGCG TCGACGTGGG CAACCTGATC CGCGAAGGCG ACACCAACGG TCTCGTGGTC
CTCACCCAGA CCCGGCCGAT CACCGTGACG TTCACCATTC CCGAGGTCGA CCTCCAGTCG
GTGCTCGATC CTTTCCGCGC CGGCGAGTCA CTCGTCGTCG AGGCGTGGGA CCGCCGCGAA
ACCGCCGTGC TCGCCACCGG CGTGCTCAAA ACGCTCGACA ACCAGATCGA TACCGCCACC
GGCACGCTGA AGCTCAAGGC CGAGTTCGCG AACGAGGACG AGCGGCTGTT TCCCAACCAA
TTCGTCAATG TCCGGCTGCG CGTCCGCACG CTGGAGCAGG CTGTCGTCAT TCCCGCGGCC
GCGGTGCAGT TCGGCTCGCG CGGCACGTAT GTTTATCTCG TCGATGCCGA CAAAAAGGCG
GCGATCCGCG ACGTCGTGCT CGGGCCTGTC GACGGTTCCG AGCAGGCCAT CACCAAGGGG
CTCGCGCCCG GCGATCAGGT CGTGCTCGAG GGACTCGATC GTCTCCGCGA GGGCCGCGGC
GTGATCGTGA CCAACGACCC CGCTTCCGCG GCTCCGGCCG CTCCCGCCGC CGCCAGCAAC
GGCAACGCGA AAGCCGCCAG GAAATGA
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| Protein sequence | MSLFSRPRFR WFLYVAVVLL MGFGTWYFAL RSKPERPRYP QPEWAGNTWP PLIPVRTVTA
EKRDLPVHLK AIGTVTPLNT VTVKARVPGQ LLRIAFEEGQ RVERGQVLAE IDPAPYRIVL
AQAEGRLQQA MAQLESARSD FERTTNLHRQ NLVTDQQLQL QDALVAERAG AVATAQAQVE
DARLQLSYTR VEAPIAGRAG LRRVDVGNLI REGDTNGLVV LTQTRPITVT FTIPEVDLQS
VLDPFRAGES LVVEAWDRRE TAVLATGVLK TLDNQIDTAT GTLKLKAEFA NEDERLFPNQ
FVNVRLRVRT LEQAVVIPAA AVQFGSRGTY VYLVDADKKA AIRDVVLGPV DGSEQAITKG
LAPGDQVVLE GLDRLREGRG VIVTNDPASA APAAPAAASN GNAKAARK
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