| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1105 |
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| Symbol | |
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| ID | 6205854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1370858 |
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| End bp | 1372975 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641690748 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001817993 |
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| Protein GI | 182412927 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.340579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCACG TGCCTGCCAT CTTCGGCGAG AGCGGCCGGG GTCAGCGACC CCGGCTACAA
CCGCGGGATG CTCACCGGCC TGCCATCTCC GGCCACTACG ACGGTCGGTG CCGCGTGATC
ATCGAAGGCG TGACGCCGCA GCTCGACGGC GGGCGCTATC CGATCAAGCG CGTGCTCGGC
GAGGAAGTCG TCGTCGAAGC GGATATTTTC GCCGACGGAC ATGATTCACT GTCGGCGCGG
CTGCTGTATC GAGTTGAGGG AGCGGGTGAG AGGGAAAACG AGAACGAGAA CGAGAAAGAG
AACGAGGATG AGTGGAAGGA GGTGGAGATG GTGGCGGTGG GCAACGACCG CTGGCGGGCG
GCGTTCCCGA TCGAGCAACT CGGTCGCTAC CGCTACACGG TCGAAGGCTG GGTCGACCAC
TTCAAGACCT GGACGCACGA CTTCGAGAAG AAGGTTGCGG CCGCGCAGGA CGTGCATGTG
GACTTGCTGA TCGGAGCCGA GCTCGCGCGG ACGGCGGCGC GGAAGGCGAG CGGCGCGGAT
CGCGCGCTGT TGGAGCAATG GGCCGGCGAA CTGGCCGGTG ATCAGGATGC GGCGCGGCGG
ATCGCGCGGG CGCGTGATGC GGTCGCATTG GCGCTGATGC TGCGTTATCC GGATCGCTCA
CTCGCGACGC GCTACGATCA AGAACTCGTC GTCTGGGCCG AGCCGGTCCG CGCGCGCACC
GGCGCTTGGT ATGAACTGTT CCCCCGGTCG ATGGGCGAGG GAGAGCGACA CGGGACGCTG
CGCGACGTGG AGGCCCAGTT GCCCCGGATC GCGGAAATGG GATTCGACGT GCTCTATCTG
CCGCCGATCC ATCCGATCGG TTATGCATTT CGGAAAGGCC GCAACAACTC GCCCGAGGCC
GCCCCGGAGG ATCCGGGCAG TCCATGGGGC ATCGGCAGTC CGGAGGGCGG ACACAAGTCG
ATCCACCCGC AGCTCGGGAC GCTGGAGGAT TTTCAGCGGC TGCTAACGCG CGCCCGTGAA
TTGCAGATCG AGATCGCGCT CGATATCGCG CTGCAGTGTT CGCCGGACCA TCCTTACGTG
CGCGAGCATC CGGAGTGGTT CAAGCACCGG CCCGACGGCT CGATTCAATA CGCCGAGAAT
CCGCCGAAGA AATACCAGGA CATCTATCCC TTCGATTTCG AGACCAGCGC GTGGCGCGAG
CTGTGGCAGG AGGCGAAGAG CGTCATCGAG CACTGGATCG AGCAGGGCGT GACGATTTTC
CGGGTCGATA ATCCGCACAC GAAGGCGTTT CCCTTCTGGG AGTGGTGCAT CGGCGAGCTG
AAGCGCGCGC GGCCCGAGCT GATCTTCCTG GCGGAGGCGT TCACGCGGCC GAAGGTGAAA
TACAACCTCG CGAAGCTCGG GTTCACGCAG TCCTACAATT ATTTCCCCTG GCGCAATACG
AGTGAGGAGT TGCGCGAGTA TCTCACGCAT CTCACGCGCA CGACCGTGCG GGAATTTTTC
CGGCCGAACC TGTGGCCGAA TACGCCTGAC ATCCTGCCGC AGGCGCTGCA GTTCGGCGGC
CGGCCGGCGT TCATGGCGCG ACTCGTCCTG GCGGCAACGC TCGGCGCGAG CTACGGGATC
TACGGGCCGG CTTACGAGAT GTGCGTGAAC GCGCCGCTGA AACCCGGCGG CGAGGAGTAT
CTCGATTCGG AAAAATACGA GATCAAGGTC TGGAACCTCA ACGAACCCGA CAGCCTGCAG
CCGCTGATCA CGCGGGTGAA CGCGATCCGC CGCGAGAATC CGGCGCTGCA CAGCAACGAC
CGGCTGGCGT TTCACGCGAC CGACAACCCG CAGCTGCTCG CCTACAGCAA GCGCACCGCG
GACCGCGACA ACGTGATCCT CACGGTCGTG AACCTCGATC CGCACAACAC GCAGGAGGGA
CGCACCGCGC TCGATCTGGC CGAGCTCGGG GTCGAACCGA AGGACACGTT CCAGGTGCAC
GATCTGCTGA CCGGCGCGCG CTACTTGTGG CGCGGCGCGG AGAACTTCGT CCGGCTCGAT
CCGCGGCACA TTCCTGCGGC GGTCTACCGC GTGGCCCGCC ACGTCCGCTC CGAATACGAA
TTCGATTACT TCATGTGA
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| Protein sequence | MAHVPAIFGE SGRGQRPRLQ PRDAHRPAIS GHYDGRCRVI IEGVTPQLDG GRYPIKRVLG
EEVVVEADIF ADGHDSLSAR LLYRVEGAGE RENENENEKE NEDEWKEVEM VAVGNDRWRA
AFPIEQLGRY RYTVEGWVDH FKTWTHDFEK KVAAAQDVHV DLLIGAELAR TAARKASGAD
RALLEQWAGE LAGDQDAARR IARARDAVAL ALMLRYPDRS LATRYDQELV VWAEPVRART
GAWYELFPRS MGEGERHGTL RDVEAQLPRI AEMGFDVLYL PPIHPIGYAF RKGRNNSPEA
APEDPGSPWG IGSPEGGHKS IHPQLGTLED FQRLLTRARE LQIEIALDIA LQCSPDHPYV
REHPEWFKHR PDGSIQYAEN PPKKYQDIYP FDFETSAWRE LWQEAKSVIE HWIEQGVTIF
RVDNPHTKAF PFWEWCIGEL KRARPELIFL AEAFTRPKVK YNLAKLGFTQ SYNYFPWRNT
SEELREYLTH LTRTTVREFF RPNLWPNTPD ILPQALQFGG RPAFMARLVL AATLGASYGI
YGPAYEMCVN APLKPGGEEY LDSEKYEIKV WNLNEPDSLQ PLITRVNAIR RENPALHSND
RLAFHATDNP QLLAYSKRTA DRDNVILTVV NLDPHNTQEG RTALDLAELG VEPKDTFQVH
DLLTGARYLW RGAENFVRLD PRHIPAAVYR VARHVRSEYE FDYFM
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