| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1101 |
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| Symbol | |
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| ID | 6204969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1363488 |
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| End bp | 1366544 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641690744 |
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| Product | endo-1,4-beta-xylanase |
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| Protein accession | YP_001817989 |
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| Protein GI | 182412923 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.520079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTCC CGCTGGTCCG CCGGCTCGGC CTGCTTGCCG GCGTGGCGCT CGGCTTCGCG
GCGCTACCCG CCACCGCCCA AGTCGTTTCC AACACCTTTG AGGACGGCAC GACGCAGGGC
TGGACCGCAC GCGGTCCGGT CACGCTGACG AGCTCGACCG ACGTCGCGCA TGCGGGCACG
CGCAGCTTGA AAACCACCGG CCGCACCGCG GCGTGGAACG GCCCCGCGCT CGACCTGCGT
CCGCTGCTCG CCGCCAACAC CACCTACACG ATCTCCGGCT GGGTGCGGCT CGTCGCCGGC
CAGCCCACGA GCAATCTGAA GTTCACCGTC GAGATGCGTG CCGCCGGCGA GGCGAGCAAC
AGCTACGTCC AGGTGAACAA CGCGACGGCC GTGACCGACG GTGCGTGGGT GCAGCTGCAG
GGCACGTTCA GCTTCACCTC AGCGAGCAAC GATAATCTTA CGCTCTACCT CGAGAGCAGC
GACGCCACCT CCGCCTATTA TCTCGACGAC TTCACGATCA CCGGCGGATC CGACGGACCC
CCGCCTGACA CCAGCGGGCT CGCGACGGAT TTTGAAACCG GCACGAGCGA AGGCTGGGGT
CCCCGCGGGC CCGTCACGCT GACGCCCACG ACCGAAACCG CTGCCACGGG CAGCTACAGC
TTGCGCGTCA CTGGCCGCAC GGCGTCGTGG CAGGGACCGA CGATCAACGT GCTCGGCAAG
CTCTCCAAGG GCTCCCGCTA CGCGATCGGC GTGCGCGTGA AACTCCTCGC GGGCGAGCCC
GCCAGCAATG TCCGCGTCAG CCTGCAGGCC GACAACAACG GGTCCACGTC CTTCCTCACC
GTCATCGGCA ACACGCCCGT CACCGACGCC GGCTGGGTCG ACCTCGCGAC CGTCTACAAC
TTCGGCGCCG ATGCCACGCA ACTCCAGCTC TACGTCGAGA CCGACACCGG CACCGCCTCG
TTCTACATCG ACGATTTCAT CCTCGACTAC ATCGCGCCGC CAACCGTGCA GGACATCACT
CCGGTGAAGA GCGTACTCGC CAGCTATTTC GATATCGGCG TGGCCGTCGA GCCGCCGGAG
CTCAGCGGCC CTCATGCGCA ACTCCTGCTG AAGCACTTCA ACAGCATTGT TGCGGGCAAC
GCGATGAAGT GGGGCCCGAT TGAGCCGACG GAGGGCAATT TCAACTGGGG CCCGGCGGAC
GCGATCGCGA ATTTCGCGCG CGCCAATGGG CTCAAGATGC GCGGTCACAC GCTGCTTTGG
CACAACCAGA ACCCGGCGTG GCTGTTCCGC GACGCCGTCG GCAATCCGCT CGAGTCCGGT
AACCCGGCGC ATCGCGCGCT GCTCATCCAG CGCCTGCAAT CGCACCTCAA TGCGGTCGTG
AGTCGCTACA ACGACGTCGT TTCCGATTGG GACGTGGTGA ATGAAGTGAT CGATCCCTCG
CAACCCAACG GGCTCCGCAA CACGCCCTGG CTGCAGATCA TCGGGCCCGA CTACATCGAT
CTCGCATTCC AGTTCGCCGC TGCTGCGACC ACGACCGGCG GGCTCTACAT CAACGATTTC
AACACGGAAG ACCCCGCCAA ACGCGATGCG CTCGCCAACG TCGTGCGCGG CCTGCTCGCG
CGCGGCATCC GCGTCGACGG CGTCGGACAC CAGACCCACA TCCGCATCGA CTATCCCCCG
CTCGAACGGA TCGCGCAGAG TATCGATTTG TTCACGTCGC TGGGCCTCGA CAACCAGATC
ACCGAGCTCG ACATCAGCGC CTATTCCAAC GACACCGACA CCTCACCTGT CTCGCAGGAA
ACACTCGTGC GGCAGGGCTA TCGTTATCGG GACCTGTTCG ACCTTTTCCG CGCGAAGAGC
AGCCAGATCA GCTCGGTTAC ACTCTGGGGT CTCGCTGACG ATAACACGTG GCTGAAGACC
TTCCCGATCC GGCGCGACGA CAAACCGCTG CTGTTTGACG AACAGCTCCA GGCCAAGCCG
GCCTACTATG GCGTCGTCGA TCCTTCGCAG CTGCCGGTGC TGCCGAAGAA GCTCAACGTC
ACGCAGAAGC CGGCCGGGCT GCTCAGCAAC CTGAAGACGT GGGTCGCGCT CGCACCGGTC
CCACTCGACC CGGGCGACGG CTCCGCTTCG TGGGGCCAGT TCAAGGCCGT CTGGAGCGCC
AACGCGATTC ACCTCTCCGT CGAGGTGACC GACCGCACGC GGATGCAGGC CGGCGATCGC
GTCGAGATTT TCCTCGGCGG GCAGACGTTC ACGTTCAACC GCTACGGCAT CCAGCGGCCG
GCCGGCGCAG AGGGGTTGCT CACGCCGACG CGCAACGGTT ATCTGCTGCT GGCGAGTGTG
CCCGTTTCGT CCGCGCTCAG CGTCGGCGAC AACGTGCTCT TCGACCTCCG CGTCACCGAC
GGCAGCACCG GACGCCAGCA GTCGTGGAGT GACACGCATC ACGCGCAGGA CGTCGACAAC
TCCGGTTTCG GGGCCTTCAC GCTGCTGCCG GAGAAAAACA TTGTCACCGT GGGCCGCGGC
ACGCCGACCA TCGATGGCGA ACAAGATCGC GTCTGGCGCA CCGCCACGGA GATCGTGACG
AACCGGTTCG CTTTTGGCAC CTCGGGCGCG ACCGCCCACG TGAAGCTGTT GTGGGACAGC
GGTCATGTCT ACCTCTACGC CACGGTAGCC GATCCGGTGC TGAGCAAGGC CAGCCCGAAT
CCTTGGGAAG AAGACTCGGT CGAAATCTTC GTTGATCCGA ACAACGCGCA GACGACGAGC
TACCAATCGG ACGACGCGCA ATATCGCGTG AACTTCGACA ACGAGGTGAG TGCCGGCGGC
ACGAGCTCGG TCGCCCGGAT CGTCAGCGCC ACGCGCCGCG TGAGCGGCGG CTACGTGGTC
GAGGCAGCGA TCGCTATCGA CGCCGGCGAA ACGGTCCGCG GCTCGGCCCT GGGCTTCGAC
TTGCAGGTGA ACGATGACTC GGGCGGCGGC ACCCGCACGA GCGTCGCCAC GTGGAACGAC
GAGTCGGGCA ACGCTTATCA AGACACCTCG CAGTTCGGCG CGATCATCCT CCGATAA
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| Protein sequence | MMLPLVRRLG LLAGVALGFA ALPATAQVVS NTFEDGTTQG WTARGPVTLT SSTDVAHAGT
RSLKTTGRTA AWNGPALDLR PLLAANTTYT ISGWVRLVAG QPTSNLKFTV EMRAAGEASN
SYVQVNNATA VTDGAWVQLQ GTFSFTSASN DNLTLYLESS DATSAYYLDD FTITGGSDGP
PPDTSGLATD FETGTSEGWG PRGPVTLTPT TETAATGSYS LRVTGRTASW QGPTINVLGK
LSKGSRYAIG VRVKLLAGEP ASNVRVSLQA DNNGSTSFLT VIGNTPVTDA GWVDLATVYN
FGADATQLQL YVETDTGTAS FYIDDFILDY IAPPTVQDIT PVKSVLASYF DIGVAVEPPE
LSGPHAQLLL KHFNSIVAGN AMKWGPIEPT EGNFNWGPAD AIANFARANG LKMRGHTLLW
HNQNPAWLFR DAVGNPLESG NPAHRALLIQ RLQSHLNAVV SRYNDVVSDW DVVNEVIDPS
QPNGLRNTPW LQIIGPDYID LAFQFAAAAT TTGGLYINDF NTEDPAKRDA LANVVRGLLA
RGIRVDGVGH QTHIRIDYPP LERIAQSIDL FTSLGLDNQI TELDISAYSN DTDTSPVSQE
TLVRQGYRYR DLFDLFRAKS SQISSVTLWG LADDNTWLKT FPIRRDDKPL LFDEQLQAKP
AYYGVVDPSQ LPVLPKKLNV TQKPAGLLSN LKTWVALAPV PLDPGDGSAS WGQFKAVWSA
NAIHLSVEVT DRTRMQAGDR VEIFLGGQTF TFNRYGIQRP AGAEGLLTPT RNGYLLLASV
PVSSALSVGD NVLFDLRVTD GSTGRQQSWS DTHHAQDVDN SGFGAFTLLP EKNIVTVGRG
TPTIDGEQDR VWRTATEIVT NRFAFGTSGA TAHVKLLWDS GHVYLYATVA DPVLSKASPN
PWEEDSVEIF VDPNNAQTTS YQSDDAQYRV NFDNEVSAGG TSSVARIVSA TRRVSGGYVV
EAAIAIDAGE TVRGSALGFD LQVNDDSGGG TRTSVATWND ESGNAYQDTS QFGAIILR
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