| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1089 |
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| Symbol | |
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| ID | 6206613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1349433 |
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| End bp | 1351133 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641690732 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001817977 |
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| Protein GI | 182412911 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.122836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTCC CCTCCCTGTT CCGCTTCGCT TTCATCCTTC TGCTCGCCGC GTCCACCAGC
GCCTTCGCCG CCGATCTCAA CGGCCGCTGG AGCCTGCACT TCGGCGGACC CGACGGCCCG
GAGATCATCT ACACCTTCAA GGTCGATGGC ACCAAGTTCA CCGGCTCCTC CGACTCGCCG
TTCGGCGTCG GAGAAATCCG CGACGGCCGC GTCGACGGCG CAACGTTTTC CTTCTCGCTC
GTCGCGACCG ACGGCAACCT GATCGCGCAC CGCGGCCGGA TCGTGTCCGA CAACGAGCTC
GCGCTTGAGG TCATCGGCTT CGGCGACGGC ACGCCCGCCA AGGTTGTCCG CGCTCCCGAT
GTCCCGGCTG GACCGCAGCC GCCGCCCGCG CCCACGCCGG TGACCCGCAC GCATTCGTGG
TGGCAGGACC GCCCCGTCGG CCAGAAGCCG TTCACCACCG AGGCGAAGAA GCTCCCGCTG
ATTTCCGTTC AGGGAAACAA GTTCGTGGAT TCGCAGGGTC GCACCATGCT GTTCCGCGGA
CTCGCGATTT CCGATCCCGA CAAGCTCGAC ATCCAGGGCC ACTGGAACCG CGAGCATTTC
GTGAAGGTGA AGGAAATGGG CACGATGGTG GTGCGGATTC CGGTGCACCC GGCCGCGTGG
CGGCAGCGCA CGCCGGTCGA ATACCTCAAA ATGCTCGACC AGGCGGTCTA CTGGTGCACC
GAGCTCGAGA TGTACGTGAT GATCGACTGG CACAGCATCG GCAACCTCGC GACCGGCGTA
TTCCAGGATC CGATGTACGA CACCACGCTG GAGGAAACGA ACAACTTCTG GCGGATCATG
GCGCGGCACT ACGTCGGCCA CCAGACGGTC GCGTTCTTCG AGCTCTTCAA CGAGCCCACG
ACCTATCGCG ACCAGCTCGG GCCGGTCTCG TGGAGCGAGT GGAAGCGGAT CATGGAAACG
CAGATCACGA TGATCCGCGC CGCGAACCCG CACGTGATCC CAGTGGTGGC GGGATTTGAT
TGGGCCTACG ACCTGACGCC GCTCCGGCAG GAGCCGATCA ACGCCGAGCG GATCGCCTAT
GCGGTGCATC CGTACGCGAA CAAGCGCCCG CAGCCATGGG TGCCGCGCTG GGACTCGGAT
TTCGGATTTG CGGCGAGCAA GTATCCGGTG ATCGCGACGG AGTTTGGAGG TTTCCCGAAA
GCGGCGGCGC CGGGCGAGAC GCCGACGCCC GCGCAGCGCA ACGCGAACTA CGGGCCGGAG
ATCATCAAGT ATCTCGAAGG CCGGGGCATC AGCTGGATCG TGTGGTGTTT CGATCCGCAA
TGGGGGTCCG ACGCTGATCA AGAACTGGAA TTACGAGCTG AACGACTCCG GCGAGTTCGC
CAAAGCCGCC ATGCACGGCG AAGTGAAGTA GCGCCGTCTG TTGGCCGTCG ACCGTTCACC
GTCCCTTGGG AGCGCGGGCG TCCCGCCCGC TCGTCCGTAG CGGATCACGT GCGCGTTCGC
ACGCCTGCGT CCCCCGTCCA CCGCTCACCG GCCACCGTTC GAGGTTCACT GCTTCACCGC
CCACCGCTTC ACGGCCTCAC CATCCGTCCA CCATTCCCCG CCCACCGTTT TCCGTCCGTC
CTCCGACCAA ACTCTTGCAC CAGCGCCCAT TCGCAGCGTA CAATAGTTCG TCCGCTTCCG
CCGCGCCTAG GCCCCCGATG A
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| Protein sequence | MRLPSLFRFA FILLLAASTS AFAADLNGRW SLHFGGPDGP EIIYTFKVDG TKFTGSSDSP
FGVGEIRDGR VDGATFSFSL VATDGNLIAH RGRIVSDNEL ALEVIGFGDG TPAKVVRAPD
VPAGPQPPPA PTPVTRTHSW WQDRPVGQKP FTTEAKKLPL ISVQGNKFVD SQGRTMLFRG
LAISDPDKLD IQGHWNREHF VKVKEMGTMV VRIPVHPAAW RQRTPVEYLK MLDQAVYWCT
ELEMYVMIDW HSIGNLATGV FQDPMYDTTL EETNNFWRIM ARHYVGHQTV AFFELFNEPT
TYRDQLGPVS WSEWKRIMET QITMIRAANP HVIPVVAGFD WAYDLTPLRQ EPINAERIAY
AVHPYANKRP QPWVPRWDSD FGFAASKYPV IATEFGGFPK AAAPGETPTP AQRNANYGPE
IIKYLEGRGI SWIVWCFDPQ WGSDADQELE LRAERLRRVR QSRHARRSEV APSVGRRPFT
VPWERGRPAR SSVADHVRVR TPASPVHRSP ATVRGSLLHR PPLHGLTIRP PFPAHRFPSV
LRPNSCTSAH SQRTIVRPLP PRLGPR
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