Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1078 |
Symbol | |
ID | 6205386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1337150 |
End bp | 1338151 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641690721 |
Product | restriction endonuclease |
Protein accession | YP_001817966 |
Protein GI | 182412900 |
COG category | [S] Function unknown |
COG ID | [COG4127] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.272779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAA ATGCCTGGAT GATCCGCGCG GGCGAAGGCG GATACTTGAT CGAGGAGTTC GCCAAAGGCT TGGTCACCGT CGGCTGGCAT GAGGTCGGCG AAATCAAAGA CACGTCGCAG CGCGACCTCT GGCTCCGGCT CGCGACCGTC TACCCCGGAT CGAAACCAGC GACGAACCAG AATGCCGCGT CGGTTCTGTG GCGATTTGCT CGGGTCGTTA AAGTTGGCGA CGCCGTCGTG ACCTACGATC CGACCAAACG GGAGTACCTA CTCGGCGTGG TAACGAGCGA CTACGGCTAC GAGCCGAAAC GATCTAAAGA GCATCCTCAC ACACGCGAGG TGACATGGGA AGCCCGGGTC TCGCGTGACG CGTTGAGCGT GGCGACCCGC AATTCGCTCG GAAGCACGCT GGCGTTGTTT GCAGTCCCGG ACGCGGCATT CACTGAGCTG CAGGCGGCAT CGGAGTCAAA GAAGACGGCC GAACCCACCA GCGGAATCGA AGACCGCAAG GAGCAACTGG TTCAATCCAA CCGCGACGCC GAAGAGCAAT CGCGTGAACT CATCGAAGAC CGGATCCTCG CGCTCGATCC TTTCGAGATG CAGGAGCTGA TTGCGGCGGT GCTGCGGGCG ATGGGCTATC GCACGCGCGT TTCGCCACCG GGCTCAGATC GGGGCATCGA CGTGCTGGCG TCGCCGGATG GGCTCGGGCT CCAAGAACCA CGAATCAAAG TCGAGGTGAA GCACCGGCCG GGCACCGCGA TGGGCTCACA GGAAGTTCGC AGTTTCATCG GCAGCCTGCG CTCAGGGGAT CGCGGGCTCT ACGTCAGTAC CGGCGCGTTC TCGAAAGAAG CGAAATACGA GGCCGAACGC GCTACGATTC CCGTCACGCT CATTGACCTG CGTGATCTCG CGCAGCTCGT CACAGATAAC TACGAGAATT TCGACACCAA GGGTCGCGCA CTCCTCCCGC TCGTCAGAAT CTATCGCCCT GCCGCAGAAT AG
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Protein sequence | MSKNAWMIRA GEGGYLIEEF AKGLVTVGWH EVGEIKDTSQ RDLWLRLATV YPGSKPATNQ NAASVLWRFA RVVKVGDAVV TYDPTKREYL LGVVTSDYGY EPKRSKEHPH TREVTWEARV SRDALSVATR NSLGSTLALF AVPDAAFTEL QAASESKKTA EPTSGIEDRK EQLVQSNRDA EEQSRELIED RILALDPFEM QELIAAVLRA MGYRTRVSPP GSDRGIDVLA SPDGLGLQEP RIKVEVKHRP GTAMGSQEVR SFIGSLRSGD RGLYVSTGAF SKEAKYEAER ATIPVTLIDL RDLAQLVTDN YENFDTKGRA LLPLVRIYRP AAE
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