| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1072 |
|---|
| Symbol | |
|---|
| ID | 6208670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1332499 |
|---|
| End bp | 1333074 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641690715 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001817960 |
|---|
| Protein GI | 182412894 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.993278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTCCT CAATTCGCCG TTGGATTTTT TCCGCACTCC TCACGATCTT CATCACAAAC
CTCGCGGACG CCGGACCGCC CCCACCGGCG CCTCGGCCAC AGATCGACCT GCCGCCGCTC
GGCGAGGAAG TGCCGCTGCC GAAAATCCGG CAAATCTGCG AGCACTACGG ACTGCACCAA
CTGTGGCGGA AGATCGAAGC CGATCCACCG CCGCGCCCCT TTCGCAGCGA CGGCTGCACC
GGCTGGTTCG ACGACTGGAA GGGCGTCAGC CTCTACCCCG CCGGATTTCT GCACGACCTG
AAATACTGGG CCGGCTATCC CGGCGAGGAG GTCGAGCGGC TCGTCGCCGA TGCGGAGTTG
ATGATCGACG TGGCGCGTTT GCTCGGCTCG ACCGAGATGG CCGAGACGAT GTTTCACGGC
GTGAGGCTCG GCGGCAGCGA CAAGTTCAAC GCGTCGTTCT CCTGGGGTTT TGGCCGCCGA
CCGCTCGCGC CTGTCCCCGC GGCGCCGGCA GCCGACCGCC CGCAGGCAGT TCCGGCGGCC
TTCCCGCAGA CAGCGTCGCC GCCGAGTTCT GCGTAA
|
|---|
| Protein sequence | MHSSIRRWIF SALLTIFITN LADAGPPPPA PRPQIDLPPL GEEVPLPKIR QICEHYGLHQ
LWRKIEADPP PRPFRSDGCT GWFDDWKGVS LYPAGFLHDL KYWAGYPGEE VERLVADAEL
MIDVARLLGS TEMAETMFHG VRLGGSDKFN ASFSWGFGRR PLAPVPAAPA ADRPQAVPAA
FPQTASPPSS A
|
|---|
| |