Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1062 |
Symbol | |
ID | 6204634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1323453 |
End bp | 1324199 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641690705 |
Product | hypothetical protein |
Protein accession | YP_001817950 |
Protein GI | 182412884 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTATC TCCGTCCACC CATGGATGTG CACATCGGCT GCTCGGGTTG GTTCTACTCT CATTGGCGAG GCATCTTTTA TCCGCCGCAG GAACCCACGA CGAAGCTCTG GTTCGGCTAC TACGCGAACG TCTTCCGCAC GGTGGAACTG AACGCCCCGT TTTACCGCTG GCCCACGCCC GCGACCGTCC GCCGCTGGAA ACGGGACGCA CCGCCCGGTT TCGTGTATTC CGTGAAGGTC AACCAGACGA TCACGCACCA GCGCCGGCTC GTTCGTACCC GGAAGTTGAT CGAATCGTTT TACGCGATCG CCGAAACTCT CGGCGAGAAG ATGGGCTGCT TCCTGTTTCA ATTCCCGCCG AGCTACCACT ACACGCCCGC CCGCCTCAAG AGCCTCCTGG CGCAACTCGA TCCGGCTCGC CGCTCCGTCG TGGAGTTCCG ACACAAGAGC TGGTGGCGCG ACGCGGTGTA TCGCGCGTTC GCGCAGCGAC GACTGATCTT CTGTGCCGTC AGCGCTCCTC GGTTGCCCGA GACCTTTCCG TCCCATCAGG AGATTCTTTA TGTCCGATTT AGCGGCAAGA CGCGCTGGTA TCGGCACGAC TATTCTGCCG AGGAGTTGGC GGTGTGGGCC GACCGGATTC GCGCTTCCGG CGCGAAGGAA GCGTGGATTT ACTTCAACAA CGACCGGCAG GGCTTCGCGA TCAAGAACGC GCTTGTCCTT CGCCGTTTGC TGCGCGCCAA ACGTTGA
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Protein sequence | MDYLRPPMDV HIGCSGWFYS HWRGIFYPPQ EPTTKLWFGY YANVFRTVEL NAPFYRWPTP ATVRRWKRDA PPGFVYSVKV NQTITHQRRL VRTRKLIESF YAIAETLGEK MGCFLFQFPP SYHYTPARLK SLLAQLDPAR RSVVEFRHKS WWRDAVYRAF AQRRLIFCAV SAPRLPETFP SHQEILYVRF SGKTRWYRHD YSAEELAVWA DRIRASGAKE AWIYFNNDRQ GFAIKNALVL RRLLRAKR
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