Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1033 |
Symbol | |
ID | 6205841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1286777 |
End bp | 1287583 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641690657 |
Product | hypothetical protein |
Protein accession | YP_001817921 |
Protein GI | 182412855 |
COG category | [S] Function unknown |
COG ID | [COG3735] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.413246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTTCA AGCGTCCGTT GCCTCGTGCC TTGTGCTGGA GCATCGTCGA GCGCCCGATC ACTTTGCTTG CGACCATACA TACCGGCCCC TTCGGCGGAT ACCAATTTCC GCCGATGGCT GATGCGCTCA TTCACGGCGC GGACATAGCG TATTTCGAAA TCGATCCGCT GGAGAAATGG GACATTGGCT TCATGTTTCG ACCAACGAAC TCGGCAACCA CTTTGTTGCA GGAAGTTGGC CCGGCGATCT ACCGGCGCTT GGAGCAGGAA CTCTCCCTCA ATCGACCGCT GGCAAATTGT GCCGCTGGTG GAATCGGCGA CCTAATCGAG CTGTCCACAC CGACTCAGAT GACAGCGGGA TATGAAATGG ATTGGGGCGT CGACCGAACG GTCTGCCAAC GCTACCGCGC TCAAAAGAAG GAGATTCGCT TCCTGGAGAC GAGCGAGGAC CAAGGCCGGG CAGCGGTCAG CGGGCCGTTG CACGAAATCG TTGCGGAGCT GGACGCTTGG CGGACCACCG GCTGCCTCCC TCGGGCGGAT AGCACCCAGA TACTCAACGC GTACGAAGCC GCTGACCTCC CGACCCTCGC TCGCTTGCGC AGCGAGTTGG CGCCGCTGCG GCCAACGAGG ATACTCGCAC AACTTCAGGA ACGCGAAAGC CGTTGGCTCG AAAAAATCGT GGATATAGCG GCGGAGAAAA AGTCTGTCCT GATAGCAGCC GGGGTCCTGC ATTTTCCGGG CGAGGATGGC TTGCTCTCCC AGCTAAGCCG GCGCGATTTC ACGGTCCTCG ACATTGGCAG CCAATAG
|
Protein sequence | MNFKRPLPRA LCWSIVERPI TLLATIHTGP FGGYQFPPMA DALIHGADIA YFEIDPLEKW DIGFMFRPTN SATTLLQEVG PAIYRRLEQE LSLNRPLANC AAGGIGDLIE LSTPTQMTAG YEMDWGVDRT VCQRYRAQKK EIRFLETSED QGRAAVSGPL HEIVAELDAW RTTGCLPRAD STQILNAYEA ADLPTLARLR SELAPLRPTR ILAQLQERES RWLEKIVDIA AEKKSVLIAA GVLHFPGEDG LLSQLSRRDF TVLDIGSQ
|
| |