Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1031 |
Symbol | |
ID | 6205435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1283462 |
End bp | 1284211 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641690655 |
Product | hypothetical protein |
Protein accession | YP_001817919 |
Protein GI | 182412853 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.269343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCATCTA GTACAAGAAA ATGTGAGATT TGCGGTGGCC AATCCTATAT CGCTGACAGC TGGTGTGGCC AGATTCAGCA GAAATGCCGC TCGCCTACCT CCCTCGCCAT GGGCGATCGG CAGGAAAAAT CGCATCGATT CGCAAAGCGG CCAAGAGGCT TGACGCGGTA TCAAACCTGC CAACATGTCC ATATGGCCCA TACCCCTATT CAGGTGGAGG TCAGTGAAAA GCTGGAGAAG GCAATTACCG CAATGCTTGC AATTGCACCC CTTTCGGCGA GCGCTACGCT GAGCGTTTTA CGCCGAGTTG GCGAATCGAT TGCGGTTTCG CCCGATGATA TCGATGCGGC ATTCGAGCGA GTGAAGCTGC GTTCCGCGAG CGTCGAACTT GAAGTCCGCC GTCTGGATGG CGGTGGGTTG TCTGACTCGG AATTTGCGGA CAAACTAGGC ATCGCCTCGC GTCGGCGCAT TCGTGCTTAC CGTGAAAAAG GAAAACTCTT CGCATGGAAA AAGGGTGCGA GGACACTTCG GTATCCGGCG TGGCAGATTC ATGAGGGCGC TCTGTTGCCT GGCTTGGCCG AAGTCCTCTC CATTCTCGAT CGCCGAAAAA TGTCACCTTT GGCGATCGCC GACTATTTCC TAAGCGAGAG TGATGAACTG GACGGAAACC GCCCGTTGGA TCTGCTGCGG AAGAATCATG TCGAGCCGGT ACTCGCGCAC GCAGCCCGCC ATGGTGCTCA CGGGGCTTGA
|
Protein sequence | MASSTRKCEI CGGQSYIADS WCGQIQQKCR SPTSLAMGDR QEKSHRFAKR PRGLTRYQTC QHVHMAHTPI QVEVSEKLEK AITAMLAIAP LSASATLSVL RRVGESIAVS PDDIDAAFER VKLRSASVEL EVRRLDGGGL SDSEFADKLG IASRRRIRAY REKGKLFAWK KGARTLRYPA WQIHEGALLP GLAEVLSILD RRKMSPLAIA DYFLSESDEL DGNRPLDLLR KNHVEPVLAH AARHGAHGA
|
| |