| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1023 |
|---|
| Symbol | |
|---|
| ID | 6204565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1265332 |
|---|
| End bp | 1266852 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641690646 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001817911 |
|---|
| Protein GI | 182412845 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCCG CCCAGTTGAC GCTGCAGTCG GTCGAGTTCG CGCATCCGGG GATGACGGCG
CCGTTGTTCA CCGATTTGAC CGTGCAGTTC CCGTCGGGCT GGACGGGCAT TGTCGGACCG
AATGGCGCCG GCAAGACGAC GCTGCTGAAG GTCGCCACCG GGGAACTCGC TCCGCAGAGC
GGAGTGGTGC ACCGTCAGGG GCTCGCGCTG TATGTCGCGC AACGCACCGA CGACCCGCCG
GAGTTTTTCG AGGACTTTGT GTGGGCGGCC GATGCCGGCG TGCTCAAGGC GCGGCTGCGG
ATCGGTGAGG ATTGGCCGGA GCGCTGGGCC ACCCTGAGTC ATGGCGAACG GAAGCGGGCG
CAGATCGCGG TGGCGCTCTG GCGCGAGCCC GTGGTGCTCG CGCTCGACGA GCCGAGCAAC
CATATCGACT CCGACGCGCG CCGGCTGCTG TGGCAGGCGC TCCGGGACTT CGGCGGCGTC
GGGCTGCTCG TGAGCCACGA CCGCACCTTG CTCGACGAAC TTTGCCCGCA ATGTCTGCTG
CTCGATCCGC CCGAGGCGGT GATGCGGCCG GGCGGCGTGA CGGAGGCGCT GAAGCAGCAG
GAGCTCGACG AGAAGTCCGC GCACAGCGCC AGCGAAGCGC TTCGCCGGAG CGCGAACCGG
CTCCAGGCGG AGGCGCAGCG GCGCCGGGTG ATCGCAGACC AGAAGGCTGC GGCGGCCCGC
GGCTCGAAAC AGAAAAAGAT TCCCGCCCAC GATCACGACG GCCGCGCCAT GCGCAACCTC
GCGAAGCTGA CCGGCAAGGA CGCGTATGCG GGCAGGATGG TCGCGCAGAT GAGCCAGCGC
GCGAGCAAGG TGGCGGCGCA GCGCGCCGAG ATCGCCGTGA AGAAGCGCTA CGAAACCGGC
ATCTGGGTCG AGGGCGCGTC CTTCATGCCG CGGGACTTTC TGCTGCGACT GCCGGCCGGG
CACCTGCCAC TGGGCGGCGG GCGCGCACTG CACTATCCCG ACCTCGCGAT CGGCGGGACC
AGCCGCATCG CGTTGAAGGG AGCCAACGGG CTCGGCAAGA GCACGCTCGT CCGGCATCTG
CTCGGCCAGC TGCAGTTGCC GGCGGAGAAG GTCGTGACGG TACCGCAGGA AATCTCCGCC
GAGGAGTCAC GCGCGCTGCT GGAAGCGGTG AAACGCCTGC CCAACGACGA GCGCGGCCGC
GTGATGACGA CGATCAGCCG GCTCGGTTCC CGACCGGCGC GGCTGCTTGA GAGCGCGCTG
CCAAGTCCCG GCGAGGTGCG CAAGCTGCTC CTCGCGATCG GCATCGTGCG CGGTCCGCAT
CTCATCGTGA TGGACGAACC CACCAACCAT ATGGACCTGC CCGGCATCGT CTGCCTGGAA
GAAGCGCTGG CGGACTGCCC GTGCGCGATG TTGCTGGTGA GCCACGACGA GTCATTTCTC
GCCAAGATCA CCGACACGGA CTGGCTGCTC GTGCGAGACA CGGCCGGGGA CTCACGACTG
GAGATCAGAG CCGTGACGTG A
|
|---|
| Protein sequence | MASAQLTLQS VEFAHPGMTA PLFTDLTVQF PSGWTGIVGP NGAGKTTLLK VATGELAPQS
GVVHRQGLAL YVAQRTDDPP EFFEDFVWAA DAGVLKARLR IGEDWPERWA TLSHGERKRA
QIAVALWREP VVLALDEPSN HIDSDARRLL WQALRDFGGV GLLVSHDRTL LDELCPQCLL
LDPPEAVMRP GGVTEALKQQ ELDEKSAHSA SEALRRSANR LQAEAQRRRV IADQKAAAAR
GSKQKKIPAH DHDGRAMRNL AKLTGKDAYA GRMVAQMSQR ASKVAAQRAE IAVKKRYETG
IWVEGASFMP RDFLLRLPAG HLPLGGGRAL HYPDLAIGGT SRIALKGANG LGKSTLVRHL
LGQLQLPAEK VVTVPQEISA EESRALLEAV KRLPNDERGR VMTTISRLGS RPARLLESAL
PSPGEVRKLL LAIGIVRGPH LIVMDEPTNH MDLPGIVCLE EALADCPCAM LLVSHDESFL
AKITDTDWLL VRDTAGDSRL EIRAVT
|
|---|
| |