Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1016 |
Symbol | |
ID | 6206323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1254776 |
End bp | 1257106 |
Gene Length | 2331 bp |
Protein Length | 776 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641690639 |
Product | Kojibiose phosphorylase |
Protein accession | YP_001817904 |
Protein GI | 182412838 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1554] Trehalose and maltose hydrolases (possible phosphorylases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.313972 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGC TTTGGGAAAT CAGCACCACC GAATGCGCCG GCAGCAAGGA AAGCATCATG CTCCGGGGCA ATGTGTATCA GATTGCCAAT GGCGCCATGG GCTATCGCGG CACGCTGGAC GAGTTCGGTC CGGCCGAAGC GGTGGGCATC ACGCTGGCCG GGATTTTCGA TCAAGTGGGG GAGGCCTGGC GCGAGCCGGT GAACGCGCCG AATGGCGGTT ACACCCGCGT GTCGCTCGAC GGCACCCCGC TGTCGGCCCT GGACGACACC GTCGTGGCGC ACCGGCAGGT GCTGCATTTC CGCGACGCGC GGTTTGAACG CGAGACGGTT TTCGCCGTCG GCGGAAAGAA GCTCACGTTG CGTTCGTCGC GGTTCCTGAG CGTGGTCGAG CCGAATCTGG GTGTGATCCG GCTTTCGGTG TCGTGCGACC AGGATGCGGA TATCGCGATC GCCACGGGCA TCGACTACAA CATCTGGGAC CTGAATGGAC CGCACCTGCG TGAGCTCACG CCGAGCCAGT CGGACGACCT GCTGTGCGTG GACGCCCGGA CCCACGAAGC CCGCAAGCGC GTCGCGGTGG CTGAGGCGGT TGCGACCGAA CTCGGCGGCA GCCAGCCGCT CGTCGCGGAG AACCGGAACC TGCGGCGCTT CGCGTTTCGC GCGCGGGCTG GGGAAATCTA CGTGCTCGAC AAGTTTTTCG CGGTGTTCGC CGAGCAGGAT TCGCCGGCCA CGCCGCCGGC GCGCGGGGCC CTCGAACTCG TCAAGCGCGC GCGGCAACTC GGTCGCGACG CGTGCCTGGC GCAGCACGCC GCCGAATGGC AAAGCCGCTG GGCGCGCTGC GACGTAGTGA TCGCCGGCGA CGACGAAGCG CAGCAGGCGC TGCGCTACAG CCTCCTGCAG CTGTTGATGG TCGCGCCCGT GCAAGGGAGT GCGAACTCGA TTCCGGCCCG GGCGTTGTCG GGGCAGGTCT ACAAGGGTGC GGTGTTTTGG GATACGGAGA TGTTCATGTT GCCGTTCTTT CTGCACACGT ATCCCGAGAA GGCCGTGGAG CTGCTGCGCT ACCGGATCCG GACGCTCGAC GGCGCGCGGC GCAAGGCGCA GACGGAGGGG CCGGGCTATC GCGGCGCCTT CTACGCGTGG GAGAGTCAGG ATACGGGCGA CGACGCGTGC ACGTATTTCA ATATCGGCGA CCCGATCACC GGCCGGGAAC TGCGCACGCA TTTTCGCGAC AAGCAGGTGC ACATCAGCGG TGACGTGGCG CTCGCGCTGT GGGAATATTT CCGCATTACC GGGGACGACC GGATGCTACG CGAGGGCGGG GCGGAGGTGA TTCTGGAGTG TGCGCGGTTC TACTACTCTT ACGCGCATTT CAAGAAGGAC CGAGGCCGCT ACGAGATCCT CGATGTGATC GGGCCGGACG AATACCACGA GCGCGTCAAC AACAACGCGT TCACCAATGC GGTCGTCCGC GAGACCTTCG CGATCGCGGG GGCGGTTGTC GCGCATCTCG AGCGCACGCA TCCGGCGGAG CTGAAAACGC TGCTGGCGAA GCTCGATATC GCGGGCGAGC TGCCCGCCTT CGCCGACGCC GCCGCGCGGC TGTATGTGCC GGCGCCACAT CCGAAGACGC GCGTGATCGA GCAGTTCGAA GGTTATCTGA AGCTGCGCGA CGCCTCGGTG GAGGAACTGA AGGCGAAGAT GGTGCATCCG AACGAGTATC TCGGCGCCGG TCAGGGGCTC GCCGTGCCGA CCAAGCTGAT CAAGCAGGCG GACGTGGTGA TGATGCTGAA CCTGTTTCGT GCGCGGTATC CCACCGAAGT GAAGCAGGCA AACTGGCGCT ACTACGAGCC GCGCACGGAG CATGGCTCGA GCCTCAGCGC CTGCGCCTAC GCGATGGTCG CGACGGAGAT CGGCGAAGGG GAGCGCGCCT ACGACTACTT CCTCAAAACC GCGACGATCG ACCTCGAGGC GAAGTACAAA GTCTACGTCG GCACGACGTT CATCGGCGGA TCGCACCCGG CCGCCAACGG CGGCGCGTGG ATGACCGCCG TGTTTGGCTT CGGCGGCGTG CTGATCGAGG AGAACCGGAT TCTCATTCAG CCGCGGCTGC CGAGGAAGTG GCGGAGCTTG GAGTTTGGAC TGGAACACCG GGGCGACCGT TTCCAGATCC GGATCACCGC GGACCGCGTG TCTGTCGAGC CCGCGCTGAC GAATCGGCAC GAACACGCGT TTATGGTCGC GGGAGAACCT GTCACCTGCG CACGTGGCAA CCCGGTGACG GTGGAGCATG GCCGGAGCAA GCCCGCGCTC TCCGGCTCGC GCGCGATCTG A
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Protein sequence | MKQLWEISTT ECAGSKESIM LRGNVYQIAN GAMGYRGTLD EFGPAEAVGI TLAGIFDQVG EAWREPVNAP NGGYTRVSLD GTPLSALDDT VVAHRQVLHF RDARFERETV FAVGGKKLTL RSSRFLSVVE PNLGVIRLSV SCDQDADIAI ATGIDYNIWD LNGPHLRELT PSQSDDLLCV DARTHEARKR VAVAEAVATE LGGSQPLVAE NRNLRRFAFR ARAGEIYVLD KFFAVFAEQD SPATPPARGA LELVKRARQL GRDACLAQHA AEWQSRWARC DVVIAGDDEA QQALRYSLLQ LLMVAPVQGS ANSIPARALS GQVYKGAVFW DTEMFMLPFF LHTYPEKAVE LLRYRIRTLD GARRKAQTEG PGYRGAFYAW ESQDTGDDAC TYFNIGDPIT GRELRTHFRD KQVHISGDVA LALWEYFRIT GDDRMLREGG AEVILECARF YYSYAHFKKD RGRYEILDVI GPDEYHERVN NNAFTNAVVR ETFAIAGAVV AHLERTHPAE LKTLLAKLDI AGELPAFADA AARLYVPAPH PKTRVIEQFE GYLKLRDASV EELKAKMVHP NEYLGAGQGL AVPTKLIKQA DVVMMLNLFR ARYPTEVKQA NWRYYEPRTE HGSSLSACAY AMVATEIGEG ERAYDYFLKT ATIDLEAKYK VYVGTTFIGG SHPAANGGAW MTAVFGFGGV LIEENRILIQ PRLPRKWRSL EFGLEHRGDR FQIRITADRV SVEPALTNRH EHAFMVAGEP VTCARGNPVT VEHGRSKPAL SGSRAI
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