| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1015 |
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| Symbol | |
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| ID | 6207366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1253260 |
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| End bp | 1254768 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641690638 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001817903 |
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| Protein GI | 182412837 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.134636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTACTC CGCAAAAACC CCGCCTCGGA TTCTGGCAGC TCTGGAACAT GAGTTTCGGC
TACGTCGGAA TCCAATTTGG CTTCGCCCTT CAAAACGCGA ACGTCAGCCG CATCTTCGAA
ACGCTCGGCG CGAGCGTGCC GGACATTCCG ATCCTCTGGA TCGCCGGCCC GGTCACCGGT
TTGGTGGTGC AGCCGATCGT GGGATACATG AGCGACAAGA CCTGGAACCG GCTCGGTCGC
CGCAAGCCGT ATTTCCTCGT CGGCGCGATC CTCGCCTCGC TCGCGTTGCT CGTCATGCCC
AACTCGCCCG CGCTCTGGTT CGCCGCGGGC ATGCTCTGGA TCATGGACGC GTCCATCAAC
ATCACGATGG AGCCGATGCG TGCCTTCGTC GGCGACATGC TGCCCGACGA GCAGCGGACG
ACTGGTTTTG CGGTTCAGAC CTTCTTCATC GGCGCGAGCT CGGTGATCGG CTCGCTGATG
CCTTGGCTGC TCACGAATGT TTTCCACGTG GCGAACACGG CGCCGGAGGG CGTCGTGCCG
GACTCGGTGA AATGGTCGTT CGCGCTCGGC GGCATCGTCT ACTTCCTCAC CGTGCTCTGG
ACCGTGGTGT CGGTGAAGGA ATATTCGCCC GAGCAACAGC GGGCGTTTCA CGGGGAATCA
GAGCAACCGC AAAGCGCGGA TGTGTCGCAG CTGACGCTCG ACGCGGGCCG CTACACCCGG
CTGGGCTCGG CGCTGGTGGC GGGCGGACTG CTGGCCAGCG TCGTGATTCG CCAGCTGAGC
TGGGATCGCG GGCTCTACAT CCTCTCGTTC GGCGCCGGAG CCTACGGCCT GCTGCAGCTC
GTCGCGGCAC ACCGCTATCG CGCCGGGAAA AAGCGCGGGC TGGTCGAGCT CATTCACGAT
CTCAACAACA TGCCGGCCGC GATGCGCCAG CTGGCGCTCG CCCAGATAGC CACGTGGTTC
GCGCTCTTCG CGTTCTTCAT CTACGCGACG GCGGCCGTGG CGAACCACCA CTTCGGCAGC
ACGGATCCGC GCAGTGCGCT CTACAACGAA GGTGCCAACT GGGTCGGCGT ACTGATGTCG
GTCTACAATG GCGTCGCGGC GCTCGTCGCG TTTGCGCTGC CGCCGATGGC GCGCCGGCTG
AGCCGCGTGA AGACGCACGT CGTCTGCCTG GTGATCGGCG GACTCGGGCT CGGCTCGATG
TATTTTTTCA AGAACCCGCA GTGGCTGATC GTCTCGATGA TCGGACTCGG CATCGCGTGG
GCAAGCCTGC TCACGCTGCC CTACGCGATC CTCAGCAGCG TGGTGCCGTA TCGGAAAATC
GGCGTCTACA TGGGCATGTT CAATTTCTTC ATCGTCATCC CGCAAATCCT TGCCGCGGCG
GTCCTGGGCC TGCTCGTTCG CACGGTGTTC CACGGCCGCG CAATCGACGC GCTCCTGCTC
GGCGGCGCCT CCATGATCCT CGCCGCCGTG CTCATGCTGC GGGTGCAGGA CCAGCGGGGG
AGGACGTGA
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| Protein sequence | MLTPQKPRLG FWQLWNMSFG YVGIQFGFAL QNANVSRIFE TLGASVPDIP ILWIAGPVTG
LVVQPIVGYM SDKTWNRLGR RKPYFLVGAI LASLALLVMP NSPALWFAAG MLWIMDASIN
ITMEPMRAFV GDMLPDEQRT TGFAVQTFFI GASSVIGSLM PWLLTNVFHV ANTAPEGVVP
DSVKWSFALG GIVYFLTVLW TVVSVKEYSP EQQRAFHGES EQPQSADVSQ LTLDAGRYTR
LGSALVAGGL LASVVIRQLS WDRGLYILSF GAGAYGLLQL VAAHRYRAGK KRGLVELIHD
LNNMPAAMRQ LALAQIATWF ALFAFFIYAT AAVANHHFGS TDPRSALYNE GANWVGVLMS
VYNGVAALVA FALPPMARRL SRVKTHVVCL VIGGLGLGSM YFFKNPQWLI VSMIGLGIAW
ASLLTLPYAI LSSVVPYRKI GVYMGMFNFF IVIPQILAAA VLGLLVRTVF HGRAIDALLL
GGASMILAAV LMLRVQDQRG RT
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