| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1013 |
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| Symbol | |
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| ID | 6206310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1248271 |
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| End bp | 1252092 |
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| Gene Length | 3822 bp |
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| Protein Length | 1273 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641690636 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001817901 |
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| Protein GI | 182412835 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0530732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGA GCAAACCAGT TCCGACTACC CCTCGTGCTT GCTTGGGCTC GGCAGAGCAC
TCCCGCACCT CTCATCGCCG ACTGCTTCCG TCCTGGCTGG CCGTACTCTG CGTCGCGGCG
CCGTTCGCGG GCGCGCAGAC GACCACCCCG CCGGCGCCTG CACCGGTCGA AGACGAAGAA
ATCATCATGC TGTCGCCGTT CGAAGTGTCG GCGAGCGAAT CGGAAGGTTA CGCGGCGGCG
ACGACACTCG CGGGCAACCG GTTGAACACG CAGCTGCGCG ACGTGGGCGC GGCGGTATCG
GTGGTCACAA CACAGTTTCT GCGCGACACC GGAGCCACCG GCAACACCTC GCTCCTGCAG
TACACGGTCG GTTCCGAGGT CGGCGGCGTG AACGGCAACT TCGCGGGCAC CGGCGACGGC
GCCGTGCTGG CCGAGCCGTC CCGCCCGAGC GAAACCACGC GTGTCCGTGG ACTCGCGGCC
GCCGACAACA CCCGCGACTT CTTCCTCTCC CAGATTCCGT GGGACAGCTA CAACATCGAC
CGCGTCGATC TGCAGCGCGG TCCGAACTCG ATCCTCTTTG GCCAAGGCAG TCCGGCGGGT
ATCATCAATG CGGGCACGAA GGTGGCCAGT TTCCGCAACT CGGGCGAGGT CGAGACCCGC
ATTGGCAGCT ACGGCACCCT GCGCGGGTCG CTGGACCTCA ACCGTGAGCT CGTGGAGAAC
CAGCTGGCGA TTCGGCTCAA CCTGCTCGAC AACGAGGAGA AATACCAGCA GGAGGAGGCG
TTCACGAACG ACCGGCGCGC GGCTGGATCG CTGCGCTACG AGCCGGAGGC GCTCAATCGA
AACGGATTCC GGTTCACCGT GAAGGCCGGT TTCGAGACCG GCAGGATCGA CAGCAACAAT
CCGCGCATTC TGCCGCCGCA GGATCAGATT ACGCCGTTCT TCGAAGACGG TACCATAACC
GTAACGGATC CGAACGGAAG CGCCAGGTCA GTCGCGCGCG GAACGAATCA AGCCACCTAC
AACGGCTGGC AGCTCTGGGA CAACCAATCG GGTCGCATCG GCAGCGGCGT CGCTCGTCCG
ACCGCCTATG AGCATGCGGG CTCCATGTTG ATTCCCTACG CCTCGGATTG GATCAAGAAT
TCCAACTTCG GCGGCAGCAT CAACGCCAAC AATCCGGTGG CCTTCTTTGG CAATGGCGGC
GGTGCGCAAA CCGCCTATTG GGTCACCACC GCGAGTCAAC AGTACCAGGG AAACCTCTCG
CTCGGCTACG TCACGGCACC CGGGTCCTGG GCCAGCATCG CTCCCACCGC GACTTGGGCG
GTCAATGCGA ACCTGCCTTA CTCCGGCGCG GGCATTTTCA AGAACAACGT CATCACCGAT
CCGTCGGTCT TCGACTTCTA CAATCATTTG ATCGACGGCG ACACCAAGCG CGAACGGCAG
CGGTTCCACC GTGCGACGTT CAATGTCGCG ACCACCGCGC TGAACGACCA GATCGGTCTC
TCGTTCGACT ACAACAAGGA AGCCTACAAG TTCACGCAGA GCGCGCTCCT GGGTGGCAAC
GTGACCCTGT ATATCGATCC GATGGCCGTG TACAACAACG GCACGGCGGA CGCGGGTTTG
ACAGGCGTCC CGTACTCCGA CGGCACGGCG AATCCTAACG TGGGCCGTCC CTTTGTTTCC
TCGGTCGGCG GCAGCAACAA TTCCACTGCC ACCGAGAGTG AAGACAAGCG CGTGACGGCG
TTTGTCACTC GCGACCTCCG CGAGGATCTT CCGGGCTGGC TGGGCCGGAT TGTCGGCAAG
CATACGGTAA CCGGCCTCTG GGCGGACTCG GAGCAGACCA CCGACAATCG TGGCTGGGAC
AGCTACGGCT ACCGCGATCC GAACGTCTAT CGACTGCAGG ACCCGGATCT CGACCCGCAG
ACCGTCAACT TCACGTTCGT GCGGCCCGCG ATGGTCATGT ATCTCGGGCC GTCGTTGCTG
GGCAAGTCGG CCACCGGTGC CAGTATCCCG GTGATTTCGG GGACTCCGAT GATTGCCAGC
GGCGCGGTGA CCTATTTCGA CGATACCTGG AATGCCCCCG CGAGCGTCCG TCCGACCGAT
CCTTGGACGA ACAATGCGTT CACCCTCGAT CCGACGAAAT TGGCTCCGGG TTACTTGGCG
GCGGCGGGTG CCGGAGCGGT CAATCCCGCC AACTTCACGC AGGCGAACAA TCCCGCCAAC
TACGTGGGCT GGACGACCGC CCCGCTCAAC ATCACCCACG CTGATTCGGA CGCGAATCGC
GACGCGTTGA CGACGAGCGC GGCGTTGAAC CGAGCCCAGA CGGTGTCGAA AGCGCTCGTC
TGGCAGGGCA AGATGCTCGA CGACAGCATC GTCGCGACAC TGGGCTGGCG CAGAGACACG
GCGAAGGCCT ACGGCTTCCA GCGCGTTCTC GGAAACGACC CGCAGATCAA CTTGAGCAAC
TACACCATTA CGGGTAGCGC GAATCACGTC CTGGAAGTCG GTTCGCGCTC CGAGAGCTTC
GTGGCGCACC TGATGGACTT GCCGGGCCTC AAGGGCCTCA CGAAGAACCT GCCGTTCGAG
GTCAGTCTTG CGTACAGTCA CTCCACGAAC TTCCAGCCGC TCGCTGGCCG CGTGAATGTG
TATGGTGAGG AGATCGCACC GCCGTCCGGC AAGACGTATG ATCGCAGCAT CACGATCGCG
ACGCGGGACC AGAAATATTC GCTCAAAGTC GGCAAGTACG TCACTTCGCA GAAGAACATC
ACGTCGCTGA ACAACATCTT CGCGAACGAT TTCAACTGGT GGATCGGCAG CCTGACGAAC
TACACGAACA TGTTCGATCC GGCCATCCAG GGCGGCCCCG TCTGGGGGCC GATGAAAAGC
GGCTCCAATA TCGAGCAGTA CATGTTCAGC GACAGCACGA CGACCCAGTC GCCTGAACTG
GCGGCGCGTC AAGCCGCGGC GGTCGCAGGA GTGCGCGCGT TCCAGAATGC CGTCGATCCG
CGTTTCTGGT CAGCGTGGGG TTTCACCAGC AAAGAGTTCA TCCAGTCCAA CCAGACGGGG
AACCCGTACA CGAATGTGAA CTCCGTCCCG AACGGCTTTG CTCTCACCGA GGACGGTGTC
TCGGAAGGCT ACGAATTCGA ACTGAGCGCC CAGCCGCTGC CGAATTGGCG GCTGATCTTC
AACGCCAGCA AGATGACGGC GGTCCGCAGC AACATCGGCG GCGACGCGCT CAACGAGATG
ATGGAGCAGA TCATCACGAT GGTTAACGGC GACGGCGGAA AGATGCACTT CTGGTGGGGC
ACCTCCGATG TTCCGGATGC CCGGCAGGTG TTCTATACGG GCGTCGGAGC TCCCGGAAAC
CGCGGCCTCG GCGCGGACTG GGCCAGCCTG AAGCTGATCG AAGGCGCCTC CGCCCCGGAG
ATTCGTACCT GGCACTACAA TCTCATCACG AACTACGATT TCACCGACGG GTTCCTCAAG
GGCTTCAGTG CGGGTGGTGC CGTGCGGTAT CAGAGCGGGG ATACGCTCGG TTATCCTCCG
ACCGGCAACC CGACCGATCC GGCGAGCCTC GGGTTCGACC TCGCGAATCC CTACAAGGGG
CCGTCCGAGA CCTACGTCGA CTTTTGGGTG GGTTACCGGC GGAAGCTCAC CGCGAAGATC
GATTGGCGCG TTCAACTCAA CGTCCAGAAC GTCGGCAAGA ATGATGGTCT GATTCCCATC
ACGGTGCAGG GACCGATCCC GGGCCAGCCC GGCGGAACTC CCGCCGGCTA CCGCATCGCT
CCGGTGCAGA CGTTCACGCT CACCAACACG TTCGAATTCT GA
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| Protein sequence | MKSSKPVPTT PRACLGSAEH SRTSHRRLLP SWLAVLCVAA PFAGAQTTTP PAPAPVEDEE
IIMLSPFEVS ASESEGYAAA TTLAGNRLNT QLRDVGAAVS VVTTQFLRDT GATGNTSLLQ
YTVGSEVGGV NGNFAGTGDG AVLAEPSRPS ETTRVRGLAA ADNTRDFFLS QIPWDSYNID
RVDLQRGPNS ILFGQGSPAG IINAGTKVAS FRNSGEVETR IGSYGTLRGS LDLNRELVEN
QLAIRLNLLD NEEKYQQEEA FTNDRRAAGS LRYEPEALNR NGFRFTVKAG FETGRIDSNN
PRILPPQDQI TPFFEDGTIT VTDPNGSARS VARGTNQATY NGWQLWDNQS GRIGSGVARP
TAYEHAGSML IPYASDWIKN SNFGGSINAN NPVAFFGNGG GAQTAYWVTT ASQQYQGNLS
LGYVTAPGSW ASIAPTATWA VNANLPYSGA GIFKNNVITD PSVFDFYNHL IDGDTKRERQ
RFHRATFNVA TTALNDQIGL SFDYNKEAYK FTQSALLGGN VTLYIDPMAV YNNGTADAGL
TGVPYSDGTA NPNVGRPFVS SVGGSNNSTA TESEDKRVTA FVTRDLREDL PGWLGRIVGK
HTVTGLWADS EQTTDNRGWD SYGYRDPNVY RLQDPDLDPQ TVNFTFVRPA MVMYLGPSLL
GKSATGASIP VISGTPMIAS GAVTYFDDTW NAPASVRPTD PWTNNAFTLD PTKLAPGYLA
AAGAGAVNPA NFTQANNPAN YVGWTTAPLN ITHADSDANR DALTTSAALN RAQTVSKALV
WQGKMLDDSI VATLGWRRDT AKAYGFQRVL GNDPQINLSN YTITGSANHV LEVGSRSESF
VAHLMDLPGL KGLTKNLPFE VSLAYSHSTN FQPLAGRVNV YGEEIAPPSG KTYDRSITIA
TRDQKYSLKV GKYVTSQKNI TSLNNIFAND FNWWIGSLTN YTNMFDPAIQ GGPVWGPMKS
GSNIEQYMFS DSTTTQSPEL AARQAAAVAG VRAFQNAVDP RFWSAWGFTS KEFIQSNQTG
NPYTNVNSVP NGFALTEDGV SEGYEFELSA QPLPNWRLIF NASKMTAVRS NIGGDALNEM
MEQIITMVNG DGGKMHFWWG TSDVPDARQV FYTGVGAPGN RGLGADWASL KLIEGASAPE
IRTWHYNLIT NYDFTDGFLK GFSAGGAVRY QSGDTLGYPP TGNPTDPASL GFDLANPYKG
PSETYVDFWV GYRRKLTAKI DWRVQLNVQN VGKNDGLIPI TVQGPIPGQP GGTPAGYRIA
PVQTFTLTNT FEF
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