Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1011 |
Symbol | |
ID | 6204842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 1245991 |
End bp | 1247523 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641690634 |
Product | hypothetical protein |
Protein accession | YP_001817899 |
Protein GI | 182412833 |
COG category | [S] Function unknown |
COG ID | [COG1690] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0369421 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCATGG AAATCAAAGC GCGCGACCTG ATCGCGGCGG GTTGGCGGGA GGATGCGCGC ATGGGGATGG TGCTGAAACG CGCACGCGAG CTCGAGGCGA CGGGACTCGA TCGCGCGGGC GTGCTCGCGG CCCTCGAGGC CGATTTCCCG AAACTCGCGC TGCGGGCAGA ACTGCGCAGC ACGCCCGCGG GTTGCAGCGA GGCGATCGCG GCCGAGACAC CGGCCGAAAT CGCCAGCGTC GCGGCCTCGC GCGCGCGGAT GCTGGAGCTG TTGCACGTGC CGGTGATCAA GCGCGGAGCC CTGATGCCGG ACACGTGTCC CGCGGGCGCG GGGATCGCGA CGATTCCGGT CGGTGGTGCG ATCGAGGTGG AGAACGCGCT ACTGCCAGGC GCGCACTCGG CGGACATCTG CTGCTCGATG TTCGCCAGCT TTTTCGCCGA CAACCGTCCG GTCGGCGAAC TGATGGATCA CCTCTGGGCC TCGACGCATT TCGGCGCCGG CGGCCGGCCA CGCGGCAAGC AGTTTTACTC CACGCTGCTG GAGGAGCCGG TGTGGGATAA TCCCTTTCTC GCCGGACTGC AGGGCCGCGC GCGCGAATTT CTCGGCACTC AGGGCGACGG AAACCACTTC GCCTACGTTG GTCGGATTGA GTTCACGCCG GACCAGCATC GCGCGATCGC CCGCGCCGGG GACACCGACC TCGCCGCGGC GATCGAGCGG CGCGAAGGTG GTTTCCACGT GCTGGTGACG CACCACGGTT CGCGCGCGTT GGGCGCCAAT GTCTACAAAC ACGGGATGAT CGAGGCGCGC GCGTGGATGC GGCAAAACGC GACCAGCATC CCCGAGGCGG CCGCTTGGCT GCCGGCGGAC TCGCGCGAGG GGCGCGACTA CTGGGCCGCG CTGCAGTTCG TGGCCCGATG GACGCGGGTG AATCACGCGC TGATCCACGA CGAGTTTTTG CACCGTGTGG GTTTGCGGCC GCTGGCCCAG CTCGGCAACG AGCACAATTT CGTGTGGCAG CGCGGCGACG CGTTCTATCA CGGCAAAGGC GCGACGCCGG CTTGGCGCGA CGCGAAGGGT CGGCCGCTGC TGGGACTGAT TCCGCTGAAC ATGGCGCGGG AGATCCTGAT CGTGCTCGGC GGCGACAACG ACGAGTTTCT CTCGTTTTGT CCGCATGGCG CCGGACGCAA CCTCTCGCGC AAGGCGATGC TCGCGCCCTA CCGTGATGCC GAAGGCGACA TCGATCCGGC GCGGGTGAAG CAGGTGCTCG CCGAGACGAC CGGCGGACTC GACATCCGCT GGTTCAACGG CGCGCCGGAT TTGTCGGAGA CGCCGCTCGG CTACAAGGAC GCATCCAAGG TGAAGGAGCA GATCGAGCGG TTCCAACTCG CGTCGGTGGT GGGCGAGATT CATCCGCTCG GCTGCATCAT GGCCGGCCAG GCGGCCGAGC CGCCGTGGCT GCAGAAGAAG CGTGAAAAAC GCGCCGCGCA CAAAGCCGCG CGGCGCGAGT GGACGACAGA GAACGAAGAG TAA
|
Protein sequence | MGMEIKARDL IAAGWREDAR MGMVLKRARE LEATGLDRAG VLAALEADFP KLALRAELRS TPAGCSEAIA AETPAEIASV AASRARMLEL LHVPVIKRGA LMPDTCPAGA GIATIPVGGA IEVENALLPG AHSADICCSM FASFFADNRP VGELMDHLWA STHFGAGGRP RGKQFYSTLL EEPVWDNPFL AGLQGRAREF LGTQGDGNHF AYVGRIEFTP DQHRAIARAG DTDLAAAIER REGGFHVLVT HHGSRALGAN VYKHGMIEAR AWMRQNATSI PEAAAWLPAD SREGRDYWAA LQFVARWTRV NHALIHDEFL HRVGLRPLAQ LGNEHNFVWQ RGDAFYHGKG ATPAWRDAKG RPLLGLIPLN MAREILIVLG GDNDEFLSFC PHGAGRNLSR KAMLAPYRDA EGDIDPARVK QVLAETTGGL DIRWFNGAPD LSETPLGYKD ASKVKEQIER FQLASVVGEI HPLGCIMAGQ AAEPPWLQKK REKRAAHKAA RREWTTENEE
|
| |